RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 RASSF7Q02833 373 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 FBXL19Q6PCT2 694 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 SPICE1Q8N0Z3 855 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 GPR152Q8TDT2 470 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 SPSB2Q99619 263 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 A0A087X0B3 334 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 A6NJY4 79 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
LSM5-210ENST00000480956 STAU1O95793 577 aaKnown RBP10.13□□□□□ -0.79
LSM5-210ENST00000480956 INHAP05111 366 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 CALRP27797 417 aaKnown RBP10.13□□□□□ -0.79
LSM5-210ENST00000480956 KCTD2Q14681 263 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 MLC1Q15049 377 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 PERM1Q5SV97 790 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 C1orf53Q5VUE5 145 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 CDH19Q9H159 772 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 UBP1Q9NZI7 540 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
LSM5-210ENST00000480956 ADH1BP00325 375 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 RPLP1P05386 114 aaKnown RBP10.12□□□□□ -0.79
LSM5-210ENST00000480956 FOXK2Q01167 660 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 APOBRQ0VD83 1088 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 PIN1Q13526 163 aaPredicted RBP10.12□□□□□ -0.79
LSM5-210ENST00000480956 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
LSM5-210ENST00000480956 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
LSM5-210ENST00000480956 FXNQ16595 210 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 DRC7Q8IY82 874 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 TCEAL8Q8IYN2 117 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 BCO2Q9BYV7 579 aa10.12□□□□□ -0.79
LSM5-210ENST00000480956 SSRP1Q08945 709 aaKnown RBP10.11□□□□□ -0.79
LSM5-210ENST00000480956 AGERQ15109 404 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 RNF180Q86T96 592 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 DGKHQ86XP1 1220 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 ZSWIM2Q8NEG5 633 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 SMAD5Q99717 465 aaKnown RBP10.11□□□□□ -0.79
LSM5-210ENST00000480956 UNC93B1Q9H1C4 597 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 SCHIP1Q9P0W5 487 aaPredicted RBP10.11□□□□□ -0.79
LSM5-210ENST00000480956 ZNF69Q9UC07 566 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 PPT2Q9UMR5 302 aa10.11□□□□□ -0.79
LSM5-210ENST00000480956 E2F8A0AVK6 867 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 POTECB2RU33 542 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 S1PR4O95977 384 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 DGKZQ13574 1117 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 GFOD2Q3B7J2 385 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 NXNQ6DKJ4 435 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 SPATC1Q76KD6 591 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 BPHLQ86WA6 291 aaPredicted RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 SMAP1Q8IYB5 467 aaPredicted RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 TRIM56Q9BRZ2 755 aaKnown RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 KCNQ5Q9NR82 932 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 NOB1Q9ULX3 412 aaKnown RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 PPP2R3BQ9Y5P8 575 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
LSM5-210ENST00000480956 GSTT1P30711 240 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 RAB15P59190 212 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 FAM102BQ5T8I3 360 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 ERAP2Q6P179 960 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 SDR16C5Q8N3Y7 309 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 NKD1Q969G9 470 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 DAAM1Q9Y4D1 1078 aa10.1□□□□□ -0.79
LSM5-210ENST00000480956 PPEF1O14829 653 aaPredicted RBP10.09□□□□□ -0.79
LSM5-210ENST00000480956 F2P00734 622 aa10.09□□□□□ -0.79
LSM5-210ENST00000480956 NBPF7P0C2Y1 421 aaPredicted RBP10.09□□□□□ -0.79
LSM5-210ENST00000480956 PRPF40BQ6NWY9 871 aaKnown RBP10.09□□□□□ -0.79
LSM5-210ENST00000480956 IFT43Q96FT9 208 aa10.09□□□□□ -0.79
LSM5-210ENST00000480956 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
LSM5-210ENST00000480956 A0A0G2JS52 829 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 SLC26A4O43511 780 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 TCEA3O75764 348 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 PURAQ00577 322 aaKnown RBP10.08□□□□□ -0.8
LSM5-210ENST00000480956 FAM160A1Q05DH4 1040 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 ALFQ53S48 1182 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 FAM83BQ5T0W9 1011 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 AFAP1L2Q8N4X5 818 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 AASDHPPTQ9NRN7 309 aa10.08□□□□□ -0.8
LSM5-210ENST00000480956 GREM1O60565 184 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 RLBP1P12271 317 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 CASP2P42575 452 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 MSS51Q4VC12 460 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 TMEM67Q5HYA8 995 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 ANO1Q5XXA6 986 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 RHOVQ96L33 236 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 FOXD3Q9UJU5 478 aaPredicted RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 TNFRSF21O75509 655 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 PTMAP06454 111 aaKnown RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 CPEP16870 476 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms