RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CREB3L3Q68CJ9 461 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC174Q6PII3 467 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 IPO4Q8TEX9 1081 aaKnown RBP6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 IFNKQ9P0W0 207 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 KRT13P13646 458 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CTNNA2P26232 953 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 SKIDA1Q1XH10 827 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 SYT10Q6XYQ8 523 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 NME9Q86XW9 330 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CACNA2D3Q8IZS8 1091 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 C6orf50Q9HD87 102 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 BCAP29Q9UHQ4 241 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 PEG3Q9GZU2 1588 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 GPATCH8Q9UKJ3 1502 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC151A5D8V7 595 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 KIF3CO14782 793 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CLGNO14967 610 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TCP1P17987 556 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 RASSF2P50749 326 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TSNAXIP1Q2TAA8 658 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 MSANTD4Q8NCY6 345 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CUL7Q14999 1698 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 SPDYE4A6NLX3 237 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CHL1O00533 1208 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 RNF113AO15541 343 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 RANBP6O60518 1105 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 KAT14Q9H8E8 782 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TRAPPC8Q9Y2L5 1435 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 ATP6V1AP38606 617 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 MCTP2Q6DN12 878 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 MAIP1Q8WWC4 291 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 VTI1AQ96AJ9 217 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 RBM6P78332 1123 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TMEM132AQ24JP5 1023 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TCERG1LQ5VWI1 586 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 PAF1Q8N7H5 531 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 NEK11Q8NG66 645 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 CABS1Q96KC9 395 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 TSNARE1Q96NA8 513 aa6.94□□□□□ -1.3
PRPF4B-205ENST00000480058 PRC1O43663 620 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 FERP16591 822 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 STAT6P42226 847 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CCT2P78371 535 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 PAXIP1Q6ZW49 1069 aaPredicted RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 UBE3BQ7Z3V4 1068 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 MYD88Q99836 296 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 COL17A1Q9UMD9 1497 aaPredicted RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 STX10O60499 249 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC122Q5T0U0 273 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CYB5RLQ6IPT4 315 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 SIRT1Q96EB6 747 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 SLC26A6Q9BXS9 759 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 VCXQ9H320 206 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CPSF2Q9P2I0 782 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 SLC8A1P32418 973 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC38Q502W7 563 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 ANO1Q5XXA6 986 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 CFAP57Q96MR6 1250 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 ERBB4Q15303 1308 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 ADALQ6DHV7 355 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 TDRD7Q8NHU6 1098 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 RLBP1P12271 317 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 MYL6BP14649 208 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 DAAM2Q86T65 1068 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 BLMP54132 1417 aaPredicted RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 TSPY2A6NKD2 308 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 DEXIO95424 95 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 EXOC4Q96A65 974 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 HOMER3Q9NSC5 361 aa6.93□□□□□ -1.3
PRPF4B-205ENST00000480058 TRIM37O94972 964 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ERCC5P28715 1186 aaPredicted RBP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 IRX4P78413 519 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 FANCCQ00597 558 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ZNF569Q5MCW4 686 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GOLGA5Q8TBA6 731 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 TMOD3Q9NYL9 352 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 VPS18Q9P253 973 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 TRMT112Q9UI30 125 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 PDE6BP35913 854 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ASIC1P78348 528 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ZBTB16Q05516 673 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 SLC9C1Q4G0N8 1177 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 C8orf74Q6P047 294 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms