RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 SMARCC2Q8TAQ2 1214 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 GLI3P10071 1580 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 NEMFO60524 1076 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 ERCC6LQ2NKX8 1250 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 E4F1Q66K89 784 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 PI16Q6UXB8 463 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
PDZRN3-208ENST00000479530 M0R2C6 588 aa15.52■□□□□ 0.08
PDZRN3-208ENST00000479530 FKBP4Q02790 459 aaKnown RBP eCLIP15.52■□□□□ 0.08
PDZRN3-208ENST00000479530 SCARF1Q14162 830 aa15.52■□□□□ 0.08
PDZRN3-208ENST00000479530 PTPDC1A2A3K4 754 aa15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 ERICH4A6NGS2 130 aa15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 EYA2O00167 538 aa15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 KINO60870 393 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 SLU7O95391 586 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 FSIP1Q8NA03 581 aa15.52■□□□□ 0.07
PDZRN3-208ENST00000479530 WDR17Q8IZU2 1322 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 ME1P48163 572 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 KRT32Q14532 448 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 OSBP2Q969R2 916 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 CTAGE5O15320 804 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 IFIT1P09914 478 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 FAM160A1Q05DH4 1040 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 MAST3O60307 1309 aa15.51■□□□□ 0.07
PDZRN3-208ENST00000479530 A0A1B0GVL5 298 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 DPCR1Q3MIW9 517 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 ZMYM1Q5SVZ6 1142 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 ARMCX5Q6P1M9 558 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 CPDO75976 1380 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 PFKFB2O60825 505 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 HAND2P61296 217 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 SYT10Q6XYQ8 523 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 CEP57L1Q8IYX8 460 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 PPP1R13BQ96KQ4 1090 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 PCDH11XQ9BZA7 1347 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 PCDH11YQ9BZA8 1340 aa15.5■□□□□ 0.07
PDZRN3-208ENST00000479530 E7EWF7 191 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 FOXP2O15409 715 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 XPO4Q9C0E2 1151 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 EXOSC10Q01780 885 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 DHX32Q7L7V1 743 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 CCDC191Q8NCU4 936 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 PCDHA7Q9UN72 937 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
PDZRN3-208ENST00000479530 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 OTUD7BQ6GQQ9 843 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 NAA16Q6N069 864 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 FMR1NBQ8N0W7 255 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 MYH15Q9Y2K3 1946 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 BIN1O00499 593 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 IL2RBP14784 551 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 NDUFA8P51970 172 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 TMC6Q7Z403 805 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 NKX2-3Q8TAU0 364 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 TMEM51Q9NW97 253 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
PDZRN3-208ENST00000479530 RNF113AO15541 343 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 SMC2O95347 1197 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 SDF4Q9BRK5 362 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 L2HGDHQ9H9P8 463 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 NEDD4P46934 1319 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 H2AFXP16104 143 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 GPTP24298 496 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 XAGE2Q96GT9 111 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 KCND1Q9NSA2 647 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 DENND2AQ9ULE3 1009 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 HLFQ16534 295 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 PALLDQ8WX93 1383 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 LLPHQ9BRT6 129 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 GJB4Q9NTQ9 266 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 CEP126Q9P2H0 1117 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 FHOD1Q9Y613 1164 aa15.47■□□□□ 0.07
PDZRN3-208ENST00000479530 KCPQ6ZWJ8 1503 aa15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 CLCN6P51797 869 aa15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 NKX1-1Q15270 411 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 GORABQ5T7V8 394 aa15.46■□□□□ 0.07
PDZRN3-208ENST00000479530 SALL1Q9NSC2 1324 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 FANCGO15287 622 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 PDIA3P30101 505 aaKnown RBP15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 ZAP70P43403 619 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 GSDMDP57764 484 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms