RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ZRANB2O95218 330 aaKnown RBP eCLIP15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 APPP05067 770 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 CHRNA5P30532 468 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 CLCN6P51797 869 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 SRLQ86TD4 932 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 NUP62CLQ9H1M0 184 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 CARMIL3Q8ND23 1372 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 FIBPO43427 364 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 VAMP4O75379 141 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 TMCO3Q6UWJ1 677 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 LRRC8AQ8IWT6 810 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 C16orf71Q8IYS4 520 aaPredicted RBP15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 FBXO18Q8NFZ0 1043 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 UBXN6Q9BZV1 441 aa15.38■□□□□ 0.05
CNKSR3-204ENST00000479339 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 TPM1P09493 284 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 SARM1Q6SZW1 724 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 C10orf67Q8IYJ2 551 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
CNKSR3-204ENST00000479339 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
CNKSR3-204ENST00000479339 MRFAP1L1Q96HT8 127 aa15.36■□□□□ 0.05
CNKSR3-204ENST00000479339 BCCIPQ9P287 314 aaKnown RBP eCLIP15.36■□□□□ 0.05
CNKSR3-204ENST00000479339 NRBP1Q9UHY1 535 aa15.36■□□□□ 0.05
CNKSR3-204ENST00000479339 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
CNKSR3-204ENST00000479339 IVLP07476 585 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 ARHGAP27Q6ZUM4 889 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
CNKSR3-204ENST00000479339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 LOC102724159A0A0B4J2E5 919 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 SYT1P21579 422 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 DHX8Q14562 1220 aaKnown RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 PWP2Q15269 919 aaKnown RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 EXOC4Q96A65 974 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 RRP15Q9Y3B9 282 aaKnown RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 TTC31Q49AM3 519 aaPredicted RBP15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 ANO6Q4KMQ2 910 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 C2CD5Q86YS7 1000 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 PALD1Q9ULE6 856 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 JRKLQ9Y4A0 524 aa15.34■□□□□ 0.05
CNKSR3-204ENST00000479339 UTRNP46939 3433 aa15.33■□□□□ 0.05
CNKSR3-204ENST00000479339 SKILP12757 684 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 ZBTB9Q96C00 473 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 H0YIN7 160 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 PDE6BP35913 854 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 MAGEA9P43362 315 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 GNAI1P63096 354 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC93Q567U6 631 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 SMC3Q9UQE7 1217 aa15.33■□□□□ 0.04
CNKSR3-204ENST00000479339 DLEC1Q9Y238 1755 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 TRIM66O15016 1216 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 HMMRO75330 724 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 KCNJ6P48051 423 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 PDE1AP54750 535 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 GSDMDP57764 484 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 ERCC6LQ2NKX8 1250 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC144BQ3MJ40 725 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
CNKSR3-204ENST00000479339 USP27XA6NNY8 438 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ARHGAP29Q52LW3 1261 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 DEF6Q9H4E7 631 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 CHL1O00533 1208 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ATP2B1P20020 1258 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ST5P78524 1137 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
CNKSR3-204ENST00000479339 ANKRD31Q8N7Z5 1873 aa15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 CCZ1BP86790 482 aa15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 HLFQ16534 295 aa15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC91Q7Z6B0 441 aa15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 SUGP1Q8IWZ8 645 aaKnown RBP15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 ORC3Q9UBD5 711 aaPredicted RBP15.3■□□□□ 0.04
CNKSR3-204ENST00000479339 CEP83Q9Y592 693 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms