RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
RAD51B-208ENST00000479335 FBXL16Q8N461 479 aa11.72□□□□□ -0.53
RAD51B-208ENST00000479335 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
RAD51B-208ENST00000479335 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
RAD51B-208ENST00000479335 PUS7LQ9H0K6 701 aaKnown RBP11.72□□□□□ -0.53
RAD51B-208ENST00000479335 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
RAD51B-208ENST00000479335 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
RAD51B-208ENST00000479335 TCRBV5S4A2TA0A5A2 114 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 NPHP1O15259 732 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 GPAA1O43292 621 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
RAD51B-208ENST00000479335 BRD1O95696 1058 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 CPA1P15085 419 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 RXRBP28702 533 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 ALX1Q15699 326 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.53
RAD51B-208ENST00000479335 NOL8Q76FK4 1167 aaKnown RBP11.71□□□□□ -0.53
RAD51B-208ENST00000479335 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.53
RAD51B-208ENST00000479335 PROM2Q8N271 834 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
RAD51B-208ENST00000479335 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.54
RAD51B-208ENST00000479335 FGAP02671 866 aa11.71□□□□□ -0.54
RAD51B-208ENST00000479335 GRAPQ13588 217 aa11.71□□□□□ -0.54
RAD51B-208ENST00000479335 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.54
RAD51B-208ENST00000479335 FBXO33Q7Z6M2 555 aa11.71□□□□□ -0.54
RAD51B-208ENST00000479335 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.54
RAD51B-208ENST00000479335 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.54
RAD51B-208ENST00000479335 ZMYM6O95789 1325 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
RAD51B-208ENST00000479335 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 E7EWF7 191 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 SNAP23O00161 211 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 SERPINB2P05120 415 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 ST5P78524 1137 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 EXOSC10Q01780 885 aaKnown RBP11.7□□□□□ -0.54
RAD51B-208ENST00000479335 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
RAD51B-208ENST00000479335 ME3Q16798 604 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 PRR5LQ6MZQ0 368 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
RAD51B-208ENST00000479335 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 ZDHHC9Q9Y397 364 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
RAD51B-208ENST00000479335 COL4A1P02462 1669 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
RAD51B-208ENST00000479335 FOXP2O15409 715 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 GNAT2P19087 354 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 GSE1Q14687 1217 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
RAD51B-208ENST00000479335 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 TAF1P21675 1872 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 WDR19Q8NEZ3 1342 aa11.69□□□□□ -0.54
RAD51B-208ENST00000479335 MYO5AQ9Y4I1 1855 aaKnown RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 KLRG2A4D1S0 409 aaPredicted RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 ZNF213O14771 459 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 TRAK2O60296 914 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 APBA3O96018 575 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 C15orf52Q6ZUT6 534 aaKnown RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 VPS37DQ86XT2 251 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 BBOX1O75936 387 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 HIBADHP31937 336 aaKnown RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 GYG1P46976 350 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 PKP1Q13835 747 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 Q6ZUG5 572 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 MAGEB6Q8N7X4 407 aa11.68□□□□□ -0.54
RAD51B-208ENST00000479335 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
RAD51B-208ENST00000479335 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
RAD51B-208ENST00000479335 LARGE1O95461 756 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 PDCP20941 246 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 EVCP57679 992 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 NCOA7Q8NI08 942 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 CRAMP1Q96RY5 1269 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
RAD51B-208ENST00000479335 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
RAD51B-208ENST00000479335 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
RAD51B-208ENST00000479335 STX6O43752 255 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 FGD1P98174 961 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
RAD51B-208ENST00000479335 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
RAD51B-208ENST00000479335 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
RAD51B-208ENST00000479335 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 XDHP47989 1333 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms