RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SUGT1Q9Y2Z0 365 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 PASKQ96RG2 1323 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 MYH13Q9UKX3 1938 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 POLR2AP24928 1970 aaKnown RBP19.13■□□□□ 0.65
C9orf3-217ENST00000479161 APLP1P51693 650 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 CNTROBQ8N137 903 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 MTMR14Q8NCE2 650 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 GNL3LQ9NVN8 582 aaKnown RBP19.13■□□□□ 0.65
C9orf3-217ENST00000479161 HDAC9Q9UKV0 1011 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 CLEC11AQ9Y240 323 aa19.13■□□□□ 0.65
C9orf3-217ENST00000479161 PDS5AQ29RF7 1337 aaKnown RBP19.12■□□□□ 0.65
C9orf3-217ENST00000479161 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
C9orf3-217ENST00000479161 BCAMP50895 628 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 TFCP2Q12800 502 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 AAMPQ13685 434 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 ERC1Q8IUD2 1116 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 TRPM4Q8TD43 1214 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 MRIQ9BWK5 157 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 MYOZ2Q9NPC6 264 aa19.12■□□□□ 0.65
C9orf3-217ENST00000479161 PITPNM2Q9BZ72 1349 aa19.11■□□□□ 0.65
C9orf3-217ENST00000479161 A0A1B0GUL7 405 aa19.11■□□□□ 0.65
C9orf3-217ENST00000479161 KIF4BQ2VIQ3 1234 aa19.11■□□□□ 0.65
C9orf3-217ENST00000479161 SAMD7Q7Z3H4 446 aa19.11■□□□□ 0.65
C9orf3-217ENST00000479161 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
C9orf3-217ENST00000479161 TRPM7Q96QT4 1865 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 SHTN1A0MZ66 631 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 TIMM10P62072 90 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 HDLBPQ00341 1268 aaKnown RBP19.1■□□□□ 0.65
C9orf3-217ENST00000479161 CDC37L1Q7L3B6 337 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 SIRT2Q8IXJ6 389 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 WDR66Q8TBY9 1149 aa19.1■□□□□ 0.65
C9orf3-217ENST00000479161 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-217ENST00000479161 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
C9orf3-217ENST00000479161 TBC1D10BQ4KMP7 808 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-217ENST00000479161 MFSD14BQ5SR56 506 aa19.09■□□□□ 0.65
C9orf3-217ENST00000479161 MAP1SQ66K74 1059 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-217ENST00000479161 DENND2AQ9ULE3 1009 aa19.09■□□□□ 0.65
C9orf3-217ENST00000479161 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.64
C9orf3-217ENST00000479161 EGFRP00533 1210 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 CCDC102BQ68D86 513 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 KIAA0825Q8IV33 1275 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 FBXW7Q969H0 707 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 XAGE2Q96GT9 111 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 MXD3Q9BW11 206 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 SERPINA10Q9UK55 444 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 ECM29Q5VYK3 1845 aa19.08■□□□□ 0.64
C9orf3-217ENST00000479161 IGSF3O75054 1194 aa19.07■□□□□ 0.64
C9orf3-217ENST00000479161 RAB11FIP3O75154 756 aa19.07■□□□□ 0.64
C9orf3-217ENST00000479161 OS9Q13438 667 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-217ENST00000479161 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
C9orf3-217ENST00000479161 ZNF512BQ96KM6 892 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-217ENST00000479161 MAST3O60307 1309 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 WNT10BO00744 389 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 PHKA1P46020 1223 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 SCARF1Q14162 830 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 ZGPATQ8N5A5 531 aaKnown RBP19.06■□□□□ 0.64
C9orf3-217ENST00000479161 DCPSQ96C86 337 aaKnown RBP19.06■□□□□ 0.64
C9orf3-217ENST00000479161 CREBZFQ9NS37 354 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-217ENST00000479161 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
C9orf3-217ENST00000479161 ARID4AP29374 1257 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-217ENST00000479161 ADORA1P30542 326 aa19.05■□□□□ 0.64
C9orf3-217ENST00000479161 KIF1BPQ96EK5 621 aa19.05■□□□□ 0.64
C9orf3-217ENST00000479161 UQCRFS1P1P0C7P4 283 aa19.04■□□□□ 0.64
C9orf3-217ENST00000479161 DLGAP5Q15398 846 aa19.04■□□□□ 0.64
C9orf3-217ENST00000479161 RBM26Q5T8P6 1007 aaKnown RBP19.04■□□□□ 0.64
C9orf3-217ENST00000479161 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
C9orf3-217ENST00000479161 SPDYE2BA6NHP3 402 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 TMEM88BA6NKF7 163 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 SPDYE6P0CI01 402 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 KRT26Q7Z3Y9 468 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 SULF1Q8IWU6 871 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 RHPN1Q8TCX5 695 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 GGA3Q9NZ52 723 aa19.03■□□□□ 0.64
C9orf3-217ENST00000479161 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
C9orf3-217ENST00000479161 IQSEC3Q9UPP2 1182 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-217ENST00000479161 AKAP11Q9UKA4 1901 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-217ENST00000479161 RASGRF1Q13972 1273 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 NBPF9Q3BBW0 867 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 CCDC158Q5M9N0 1113 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 HHIPL2Q6UWX4 724 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 EXOC6BQ9Y2D4 811 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 PCNTO95613 3336 aa19.02■□□□□ 0.64
C9orf3-217ENST00000479161 COL1A1P02452 1464 aaPredicted RBP19.02■□□□□ 0.63
C9orf3-217ENST00000479161 MYO1BO43795 1136 aa19.01■□□□□ 0.63
C9orf3-217ENST00000479161 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
C9orf3-217ENST00000479161 ANGEL2Q5VTE6 544 aaKnown RBP19.01■□□□□ 0.63
C9orf3-217ENST00000479161 APOBEC3FQ8IUX4 373 aaKnown RBP19.01■□□□□ 0.63
C9orf3-217ENST00000479161 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
C9orf3-217ENST00000479161 EAF2Q96CJ1 260 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-217ENST00000479161 GLIS2Q9BZE0 524 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-217ENST00000479161 DCTPP1Q9H773 170 aa19.01■□□□□ 0.63
C9orf3-217ENST00000479161 SPTY2D1Q68D10 685 aaPredicted RBP19■□□□□ 0.63
C9orf3-217ENST00000479161 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
C9orf3-217ENST00000479161 TEKT1Q969V4 418 aa19■□□□□ 0.63
C9orf3-217ENST00000479161 ZDHHC15Q96MV8 337 aa19■□□□□ 0.63
C9orf3-217ENST00000479161 JAG2Q9Y219 1238 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms