RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GRIK5Q16478 980 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 SLFNL1Q499Z3 407 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
CHD3-210ENST00000479080 TAOK3Q9H2K8 898 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 PPIP5K2O43314 1243 aa15.96■□□□□ 0.15
CHD3-210ENST00000479080 C8orf34Q49A92 452 aa15.96■□□□□ 0.15
CHD3-210ENST00000479080 SUPT20HQ8NEM7 779 aa15.96■□□□□ 0.15
CHD3-210ENST00000479080 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
CHD3-210ENST00000479080 IL25Q9H293 177 aa15.96■□□□□ 0.15
CHD3-210ENST00000479080 FAM205AQ6ZU69 1335 aa15.95■□□□□ 0.14
CHD3-210ENST00000479080 SEMA3EO15041 775 aa15.95■□□□□ 0.14
CHD3-210ENST00000479080 ECE2O60344 883 aa15.95■□□□□ 0.14
CHD3-210ENST00000479080 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
CHD3-210ENST00000479080 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
CHD3-210ENST00000479080 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
CHD3-210ENST00000479080 DENND2AQ9ULE3 1009 aa15.95■□□□□ 0.14
CHD3-210ENST00000479080 TRIM6-TRIM34B2RNG4 842 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 VPS37DQ86XT2 251 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 CERS5Q8N5B7 392 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 KBTBD3Q8NAB2 608 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 RILPL2Q969X0 211 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 EVI5LQ96CN4 794 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 MXD3Q9BW11 206 aa15.94■□□□□ 0.14
CHD3-210ENST00000479080 MYO5AQ9Y4I1 1855 aaKnown RBP15.94■□□□□ 0.14
CHD3-210ENST00000479080 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
CHD3-210ENST00000479080 VPS33BQ9H267 617 aa15.93■□□□□ 0.14
CHD3-210ENST00000479080 GNL3LQ9NVN8 582 aaKnown RBP15.93■□□□□ 0.14
CHD3-210ENST00000479080 MYH13Q9UKX3 1938 aa15.93■□□□□ 0.14
CHD3-210ENST00000479080 SALL1Q9NSC2 1324 aa15.93■□□□□ 0.14
CHD3-210ENST00000479080 PSME4Q14997 1843 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 RFX7Q2KHR2 1363 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 CHMLP26374 656 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 PRDX5P30044 214 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 GTF2IP78347 998 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 LARGE2Q8N3Y3 721 aa15.92■□□□□ 0.14
CHD3-210ENST00000479080 MAST2Q6P0Q8 1798 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 TCRBV5S4A2TA0A5A2 114 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 DACT2Q5SW24 774 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 PODNQ7Z5L7 613 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
CHD3-210ENST00000479080 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 UTRNP46939 3433 aa15.91■□□□□ 0.14
CHD3-210ENST00000479080 A0A0D9SFI3 127 aa15.9■□□□□ 0.14
CHD3-210ENST00000479080 CDC45O75419 566 aa15.9■□□□□ 0.14
CHD3-210ENST00000479080 FAM227BQ96M60 508 aa15.9■□□□□ 0.14
CHD3-210ENST00000479080 SBF1O95248 1867 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 FRAT2O75474 233 aaPredicted RBP15.89■□□□□ 0.13
CHD3-210ENST00000479080 SEC24BO95487 1268 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 PDE6AP16499 860 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 ADD2P35612 726 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
CHD3-210ENST00000479080 ADGRA1Q86SQ6 560 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
CHD3-210ENST00000479080 AK9Q5TCS8 1911 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
CHD3-210ENST00000479080 FZD9O00144 591 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
CHD3-210ENST00000479080 CXCL9Q07325 125 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
CHD3-210ENST00000479080 TTLL5Q6EMB2 1281 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 WDR66Q8TBY9 1149 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
CHD3-210ENST00000479080 ABCF2Q9UG63 623 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 ZNRF3Q9ULT6 936 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
CHD3-210ENST00000479080 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 PSMD14O00487 310 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
CHD3-210ENST00000479080 RAD17O75943 681 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 MECOMQ03112 1051 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 MFSD14BQ5SR56 506 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 ZMYM1Q5SVZ6 1142 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 STRIP1Q5VSL9 837 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 OSBP2Q969R2 916 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 GMLQ99445 158 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 ZNF532Q9HCE3 1301 aa15.87■□□□□ 0.13
CHD3-210ENST00000479080 MYH7P12883 1935 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 M0R2C6 588 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
CHD3-210ENST00000479080 LMNB1P20700 586 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 FKBP1AP62942 108 aaKnown RBP15.86■□□□□ 0.13
CHD3-210ENST00000479080 GPR162Q16538 588 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
CHD3-210ENST00000479080 MAGEB6Q8N7X4 407 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 FBXW7Q969H0 707 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 ESYT1Q9BSJ8 1104 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 MAST3O60307 1309 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 CCDC88AQ3V6T2 1871 aa15.86■□□□□ 0.13
CHD3-210ENST00000479080 DICER1Q9UPY3 1922 aaKnown RBP15.86■□□□□ 0.13
CHD3-210ENST00000479080 G3V3G9 751 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms