RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 RRP15Q9Y3B9 282 aaKnown RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 POLR3DP05423 398 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZNF609O15014 1411 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 TIMM10P62072 90 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 TPM4P67936 248 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ELF2Q15723 593 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ATP5JP18859 108 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 E2F4Q16254 413 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZNF790Q6PG37 636 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
LRRFIP1-211ENST00000478958 A0A087WZG4 1122 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 SMC2O95347 1197 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 TTLL5Q6EMB2 1281 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 GJB4Q9NTQ9 266 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 HAND2P61296 217 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
LRRFIP1-211ENST00000478958 DHX32Q7L7V1 743 aaKnown RBP12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 KCNH5Q8NCM2 988 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 NLRP2Q9NX02 1062 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 PFKFB2O60825 505 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 MRFAP1L1Q96HT8 127 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 SGSM3Q96HU1 749 aa12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
LRRFIP1-211ENST00000478958 CCZ1BP86790 482 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 UTYO14607 1347 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 COPRSQ9NQ92 184 aa12.78□□□□□ -0.36
LRRFIP1-211ENST00000478958 NDUFA8P51970 172 aa12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 ST5P78524 1137 aa12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 TMC6Q7Z403 805 aa12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.36
LRRFIP1-211ENST00000478958 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 E7EWF7 191 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 CTAGE5O15320 804 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 CAVIN2O95810 425 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 MAGEA9P43362 315 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 STK38Q15208 465 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 FBXO18Q8NFZ0 1043 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 HAUS7Q99871 368 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 IFNKQ9P0W0 207 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.37
LRRFIP1-211ENST00000478958 CDC25BP30305 580 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 MAP2K2P36507 400 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 ENGASEQ8NFI3 743 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 PAG1Q9NWQ8 432 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 PDIA3P30101 505 aaKnown RBP12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 NAA16Q6N069 864 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms