RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 IKBKEQ14164 716 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 DTX1Q86Y01 620 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 BSNDQ8WZ55 320 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 OSMRQ99650 979 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 NFKBIEO00221 500 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 PDGFAP04085 211 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
VLDLR-204ENST00000478776 ALKBH2Q6NS38 261 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
VLDLR-204ENST00000478776 FMNL2Q96PY5 1086 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 USP26Q9BXU7 913 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 SOX13Q9UN79 622 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 LEMD3Q9Y2U8 911 aa6.82□□□□□ -1.32
VLDLR-204ENST00000478776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.82□□□□□ -1.32
VLDLR-204ENST00000478776 A6NHS1 94 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 EDN3P14138 238 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 USP11P51784 963 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 HHIPQ96QV1 700 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 OSBPL1AQ9BXW6 950 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 SERPINA10Q9UK55 444 aa6.81□□□□□ -1.32
VLDLR-204ENST00000478776 ANGEL1Q9UNK9 670 aaKnown RBP6.81□□□□□ -1.32
VLDLR-204ENST00000478776 PHACTR2O75167 634 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 ADAMTS4O75173 837 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
VLDLR-204ENST00000478776 NFKBIBQ15653 356 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 PAOXQ6QHF9 649 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 C14orf37Q86TY3 774 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 SLAIN2Q9P270 581 aa6.8□□□□□ -1.32
VLDLR-204ENST00000478776 SOX1O00570 391 aaPredicted RBP6.79□□□□□ -1.32
VLDLR-204ENST00000478776 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
VLDLR-204ENST00000478776 MPSTP25325 297 aa6.79□□□□□ -1.32
VLDLR-204ENST00000478776 EHHADHQ08426 723 aa6.79□□□□□ -1.32
VLDLR-204ENST00000478776 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
VLDLR-204ENST00000478776 HGSNATQ68CP4 663 aa6.79□□□□□ -1.32
VLDLR-204ENST00000478776 GTF3C2Q8WUA4 911 aaPredicted RBP6.79□□□□□ -1.32
VLDLR-204ENST00000478776 ZKSCAN3Q9BRR0 538 aa6.79□□□□□ -1.32
VLDLR-204ENST00000478776 FAM95CA0A1B0GW59 222 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 EREGO14944 169 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 USP5P45974 858 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 EXOSC6Q5RKV6 272 aaKnown RBP6.78□□□□□ -1.32
VLDLR-204ENST00000478776 SMG8Q8ND04 991 aaKnown RBP6.78□□□□□ -1.32
VLDLR-204ENST00000478776 SNX29Q8TEQ0 813 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 CHRDQ9H2X0 955 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 TIMELESSQ9UNS1 1208 aa6.78□□□□□ -1.32
VLDLR-204ENST00000478776 TNFRSF21O75509 655 aa6.77□□□□□ -1.33
VLDLR-204ENST00000478776 HOXA10P31260 410 aaPredicted RBP6.77□□□□□ -1.33
VLDLR-204ENST00000478776 GSTM4Q03013 218 aa6.77□□□□□ -1.33
VLDLR-204ENST00000478776 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
VLDLR-204ENST00000478776 TMPRSS13Q9BYE2 586 aa6.77□□□□□ -1.33
VLDLR-204ENST00000478776 SOX17Q9H6I2 414 aaPredicted RBP6.77□□□□□ -1.33
VLDLR-204ENST00000478776 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
VLDLR-204ENST00000478776 LOC100289279A0A1B0GTE1 492 aa6.76□□□□□ -1.33
VLDLR-204ENST00000478776 FAM13AO94988 1023 aa6.76□□□□□ -1.33
VLDLR-204ENST00000478776 F13BP05160 661 aa6.76□□□□□ -1.33
VLDLR-204ENST00000478776 FOSL1P15407 271 aa6.76□□□□□ -1.33
VLDLR-204ENST00000478776 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
VLDLR-204ENST00000478776 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
VLDLR-204ENST00000478776 SUGCTQ9HAC7 445 aa6.76□□□□□ -1.33
VLDLR-204ENST00000478776 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
VLDLR-204ENST00000478776 DRD2P14416 443 aa6.75□□□□□ -1.33
VLDLR-204ENST00000478776 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
VLDLR-204ENST00000478776 AMOTL2Q9Y2J4 779 aa6.75□□□□□ -1.33
VLDLR-204ENST00000478776 CYP26A1O43174 497 aa6.74□□□□□ -1.33
VLDLR-204ENST00000478776 TIAF1O95411 115 aa6.74□□□□□ -1.33
VLDLR-204ENST00000478776 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
VLDLR-204ENST00000478776 TBC1D32Q96NH3 1257 aa6.74□□□□□ -1.33
VLDLR-204ENST00000478776 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
VLDLR-204ENST00000478776 ADGRE2Q9UHX3 823 aa6.74□□□□□ -1.33
VLDLR-204ENST00000478776 FOXD3Q9UJU5 478 aaPredicted RBP6.74□□□□□ -1.33
VLDLR-204ENST00000478776 HP1BP3Q5SSJ5 553 aaPredicted RBP6.73□□□□□ -1.33
VLDLR-204ENST00000478776 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 TP53INP2Q8IXH6 220 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 ABI1Q8IZP0 508 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 FBXL18Q96ME1 805 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
VLDLR-204ENST00000478776 DLGAP3O95886 979 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 SOX4Q06945 474 aaPredicted RBP6.72□□□□□ -1.33
VLDLR-204ENST00000478776 DUSP27Q5VZP5 1158 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 VSIG10LQ86VR7 867 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
VLDLR-204ENST00000478776 LATS2Q9NRM7 1088 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
VLDLR-204ENST00000478776 CYP11A1P05108 521 aa6.71□□□□□ -1.34
VLDLR-204ENST00000478776 SSFA2P28290 1259 aa6.71□□□□□ -1.34
VLDLR-204ENST00000478776 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms