RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RAC1P63000 192 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 DAB2P98082 770 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 TMC4Q7Z404 712 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 ZFYVE1Q9HBF4 777 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 MRS2Q9HD23 443 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 RNF19AQ9NV58 838 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 FAM8A1Q9UBU6 413 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 AK5Q9Y6K8 562 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 H3BRJ5 948 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 ITPKAP23677 461 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 GSTT1P30711 240 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 PTPN12Q05209 780 aaKnown RBP6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 TRIM28Q13263 835 aaKnown RBP6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 IKBKEQ14164 716 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 PRRT3Q5FWE3 981 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 ILDR2Q71H61 639 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 MAP4K3Q8IVH8 894 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 FAM161BQ96MY7 647 aa6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 CLEC4MQ9H2X3 399 aaPredicted RBP6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
SMARCA1-204ENST00000478420 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
SMARCA1-204ENST00000478420 SORBS3O60504 671 aa6.72□□□□□ -1.33
SMARCA1-204ENST00000478420 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
SMARCA1-204ENST00000478420 VN1R5Q7Z5H4 357 aa6.72□□□□□ -1.33
SMARCA1-204ENST00000478420 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
SMARCA1-204ENST00000478420 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 ARL4DP49703 201 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 PCDH1Q08174 1060 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 FMR1NBQ8N0W7 255 aaPredicted RBP6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 SLC7A3Q8WY07 619 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 WNT8BQ93098 351 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
SMARCA1-204ENST00000478420 FSCN2O14926 492 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 SETDB1Q15047 1291 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 ALYREFQ86V81 257 aaKnown RBP6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 FBXO11Q86XK2 927 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 SEC31BQ9NQW1 1179 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 VTI1BQ9UEU0 232 aa6.7□□□□□ -1.34
SMARCA1-204ENST00000478420 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 SPATA31C1P0DKV0 1188 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 ELNP15502 786 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 COL8A1P27658 744 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 C3orf58Q8NDZ4 430 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 DDX54Q8TDD1 881 aaKnown RBP6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
SMARCA1-204ENST00000478420 ZNF423Q2M1K9 1284 aa6.68□□□□□ -1.34
SMARCA1-204ENST00000478420 SOX17Q9H6I2 414 aaPredicted RBP6.68□□□□□ -1.34
SMARCA1-204ENST00000478420 TTF2Q9UNY4 1162 aaKnown RBP6.68□□□□□ -1.34
SMARCA1-204ENST00000478420 B3GALT4O96024 378 aa6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 CD68P34810 354 aaPredicted RBP6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 GALNT11Q8NCW6 608 aa6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 KLHDC7BQ96G42 594 aa6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 CRELD1Q96HD1 420 aa6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 CEP44Q9C0F1 390 aa6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 GPN3Q9UHW5 284 aaPredicted RBP6.67□□□□□ -1.34
SMARCA1-204ENST00000478420 DLL1O00548 723 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 ZNF157P51786 506 aaPredicted RBP6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 GSTM4Q03013 218 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 PPP2R3AQ06190 1150 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 GRIK4Q16099 956 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 HGSNATQ68CP4 663 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 TPTE2Q6XPS3 522 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 ANKRD24Q8TF21 1146 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 TMEM39AQ9NV64 488 aa6.66□□□□□ -1.34
SMARCA1-204ENST00000478420 APBA3O96018 575 aa6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 CTSHP09668 335 aa6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 TAF1CQ15572 869 aaPredicted RBP6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 MRRFQ96E11 262 aaKnown RBP6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 NACC1Q96RE7 527 aa6.65□□□□□ -1.34
SMARCA1-204ENST00000478420 FBXO24O75426 580 aa6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 CYP11A1P05108 521 aa6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 NLRP12P59046 1061 aa6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 MEI1Q5TIA1 1274 aa6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
SMARCA1-204ENST00000478420 UNCXA6NJT0 531 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 C9orf172C9J069 976 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 TM4SF5O14894 197 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 VAMP1P23763 118 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 RBM25P49756 843 aaKnown RBP6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 ST13P50502 369 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms