RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.31
GFM1-207ENST00000478254 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.31
GFM1-207ENST00000478254 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.31
GFM1-207ENST00000478254 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.31
GFM1-207ENST00000478254 FAM204AQ9H8W3 233 aa13.08□□□□□ -0.31
GFM1-207ENST00000478254 CD163L1Q9NR16 1453 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 TFCP2Q12800 502 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 FMR1NBQ8N0W7 255 aaPredicted RBP13.08□□□□□ -0.32
GFM1-207ENST00000478254 CAGE1Q8TC20 777 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 FUT8Q9BYC5 575 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 REREQ9P2R6 1566 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 FANCGO15287 622 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 FOXN1O15353 648 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 IVLP07476 585 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
GFM1-207ENST00000478254 HDXQ7Z353 690 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
GFM1-207ENST00000478254 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 DHX32Q7L7V1 743 aaKnown RBP13.07□□□□□ -0.32
GFM1-207ENST00000478254 TXLNAP40222 546 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
GFM1-207ENST00000478254 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
GFM1-207ENST00000478254 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
GFM1-207ENST00000478254 MYD88Q99836 296 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
GFM1-207ENST00000478254 TIMM10P62072 90 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
GFM1-207ENST00000478254 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
GFM1-207ENST00000478254 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
GFM1-207ENST00000478254 AFMP43652 599 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
GFM1-207ENST00000478254 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 MPHOSPH8Q99549 860 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
GFM1-207ENST00000478254 ENC1O14682 589 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 CTR9Q6PD62 1173 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
GFM1-207ENST00000478254 CCT5P48643 541 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 DNA2P51530 1060 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 ENGASEQ8NFI3 743 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 STAMQ92783 540 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 PHKBQ93100 1093 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 PNKPQ96T60 521 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 GUCA1BQ9UMX6 200 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 GRM8O00222 908 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
GFM1-207ENST00000478254 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
GFM1-207ENST00000478254 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 CCDC175P0C221 793 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 NOP2P46087 812 aaKnown RBP13.05□□□□□ -0.32
GFM1-207ENST00000478254 SF3A3Q12874 501 aaKnown RBP eCLIP13.05□□□□□ -0.32
GFM1-207ENST00000478254 NCAPH2Q6IBW4 605 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
GFM1-207ENST00000478254 MRPL44Q9H9J2 332 aaKnown RBP13.05□□□□□ -0.32
GFM1-207ENST00000478254 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
GFM1-207ENST00000478254 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 PATL2C9JE40 543 aaKnown RBP13.04□□□□□ -0.32
GFM1-207ENST00000478254 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 TRIM29Q14134 588 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 HDAC5Q9UQL6 1122 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 PCDHA5Q9Y5H7 936 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 SLC20A2Q08357 652 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 ACRBPQ8NEB7 543 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
GFM1-207ENST00000478254 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
GFM1-207ENST00000478254 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
GFM1-207ENST00000478254 VSNL1P62760 191 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 CRB1P82279 1406 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
GFM1-207ENST00000478254 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms