RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 EGFRP00533 1210 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 DLGAP5Q15398 846 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 ITPRIPQ8IWB1 547 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 C2orf69Q8N8R5 385 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 SIL1Q9H173 461 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
SNX21-210ENST00000478230 GNL3LQ9NVN8 582 aaKnown RBP18.73■□□□□ 0.59
SNX21-210ENST00000478230 AKAP2Q9Y2D5 859 aa18.73■□□□□ 0.59
SNX21-210ENST00000478230 FGFR2P21802 821 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 ANGEL2Q5VTE6 544 aaKnown RBP18.72■□□□□ 0.59
SNX21-210ENST00000478230 CST9Q5W186 159 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 HHIPL1Q96JK4 782 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 MXD3Q9BW11 206 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 TLL2Q9Y6L7 1015 aa18.72■□□□□ 0.59
SNX21-210ENST00000478230 WNT10BO00744 389 aa18.71■□□□□ 0.59
SNX21-210ENST00000478230 MFSD14BQ5SR56 506 aa18.71■□□□□ 0.59
SNX21-210ENST00000478230 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
SNX21-210ENST00000478230 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.71■□□□□ 0.59
SNX21-210ENST00000478230 MTMR14Q8NCE2 650 aa18.71■□□□□ 0.59
SNX21-210ENST00000478230 NF2P35240 595 aa18.7■□□□□ 0.58
SNX21-210ENST00000478230 G3BP1Q13283 466 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNX21-210ENST00000478230 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
SNX21-210ENST00000478230 PAXIP1Q6ZW49 1069 aaPredicted RBP18.7■□□□□ 0.58
SNX21-210ENST00000478230 RCAN3Q9UKA8 241 aa18.7■□□□□ 0.58
SNX21-210ENST00000478230 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
SNX21-210ENST00000478230 TRPM7Q96QT4 1865 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 VEGFBP49765 207 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 FKBP1BP68106 108 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 SAPCD2Q86UD0 394 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 MAST3O60307 1309 aa18.69■□□□□ 0.58
SNX21-210ENST00000478230 A0A1B0GUL6 1792 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 BCAMP50895 628 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX21-210ENST00000478230 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX21-210ENST00000478230 NBPF9Q3BBW0 867 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 CERS5Q8N5B7 392 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 WDR66Q8TBY9 1149 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 GBA2Q9HCG7 927 aaPredicted RBP18.68■□□□□ 0.58
SNX21-210ENST00000478230 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
SNX21-210ENST00000478230 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
SNX21-210ENST00000478230 ADM5C9JUS6 153 aa18.67■□□□□ 0.58
SNX21-210ENST00000478230 F8W031 263 aaPredicted RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 SEMA3EO15041 775 aa18.67■□□□□ 0.58
SNX21-210ENST00000478230 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
SNX21-210ENST00000478230 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 MAP2K1Q02750 393 aaPredicted RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 CFAP100Q494V2 611 aa18.67■□□□□ 0.58
SNX21-210ENST00000478230 MRIQ9BWK5 157 aa18.67■□□□□ 0.58
SNX21-210ENST00000478230 TTF2Q9UNY4 1162 aaKnown RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 WDR33Q9C0J8 1336 aaKnown RBP18.67■□□□□ 0.58
SNX21-210ENST00000478230 ZBTB22O15209 634 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
SNX21-210ENST00000478230 CAPNS2Q96L46 248 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 DENND2AQ9ULE3 1009 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 PPP2R3BQ9Y5P8 575 aa18.66■□□□□ 0.58
SNX21-210ENST00000478230 MAP2K2P36507 400 aa18.65■□□□□ 0.58
SNX21-210ENST00000478230 HUNKP57058 714 aa18.65■□□□□ 0.58
SNX21-210ENST00000478230 TNFAIP1Q13829 316 aa18.65■□□□□ 0.58
SNX21-210ENST00000478230 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
SNX21-210ENST00000478230 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
SNX21-210ENST00000478230 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
SNX21-210ENST00000478230 JAG2Q9Y219 1238 aa18.65■□□□□ 0.58
SNX21-210ENST00000478230 ASTN2O75129 1339 aaPredicted RBP18.65■□□□□ 0.58
SNX21-210ENST00000478230 SPDYE2BA6NHP3 402 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 SPDYE6P0CI01 402 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 RLBP1P12271 317 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
SNX21-210ENST00000478230 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
SNX21-210ENST00000478230 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 CCDC102AQ96A19 550 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 BEGAINQ9BUH8 593 aa18.64■□□□□ 0.57
SNX21-210ENST00000478230 PNMA6EA0A0J9YXQ4 647 aa18.63■□□□□ 0.57
SNX21-210ENST00000478230 TFCP2Q12800 502 aa18.63■□□□□ 0.57
SNX21-210ENST00000478230 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
SNX21-210ENST00000478230 TEKT1Q969V4 418 aa18.63■□□□□ 0.57
SNX21-210ENST00000478230 POLR2AP24928 1970 aaKnown RBP18.62■□□□□ 0.57
SNX21-210ENST00000478230 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
SNX21-210ENST00000478230 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
SNX21-210ENST00000478230 NOGQ13253 232 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 POLA2Q14181 598 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 RGMBQ6NW40 437 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 ARMC9Q7Z3E5 817 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 PANK1Q8TE04 598 aa18.62■□□□□ 0.57
SNX21-210ENST00000478230 COL1A1P02452 1464 aaPredicted RBP18.62■□□□□ 0.57
SNX21-210ENST00000478230 A0A1B0GUL7 405 aa18.61■□□□□ 0.57
SNX21-210ENST00000478230 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
SNX21-210ENST00000478230 CRKP46108 304 aa18.61■□□□□ 0.57
SNX21-210ENST00000478230 TNNI2P48788 182 aa18.61■□□□□ 0.57
SNX21-210ENST00000478230 TIMM10P62072 90 aa18.61■□□□□ 0.57
SNX21-210ENST00000478230 GRM1Q13255 1194 aa18.61■□□□□ 0.57
SNX21-210ENST00000478230 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
SNX21-210ENST00000478230 PDE3AQ14432 1141 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms