RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 IL16Q14005 1332 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
CCM2-210ENST00000478169 PPP1R12BO60237 982 aaPredicted RBP12.32□□□□□ -0.44
CCM2-210ENST00000478169 ZBTB48P10074 688 aaPredicted RBP12.32□□□□□ -0.44
CCM2-210ENST00000478169 FKBP1AP62942 108 aaKnown RBP12.32□□□□□ -0.44
CCM2-210ENST00000478169 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
CCM2-210ENST00000478169 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
CCM2-210ENST00000478169 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
CCM2-210ENST00000478169 R3HDMLQ9H3Y0 253 aa12.32□□□□□ -0.44
CCM2-210ENST00000478169 IRS2Q9Y4H2 1338 aa12.32□□□□□ -0.44
CCM2-210ENST00000478169 MYO1BO43795 1136 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 IL1R1P14778 569 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
CCM2-210ENST00000478169 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
CCM2-210ENST00000478169 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 ZNF804AQ7Z570 1209 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 CERS5Q8N5B7 392 aa12.31□□□□□ -0.44
CCM2-210ENST00000478169 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
CCM2-210ENST00000478169 RBBP6Q7Z6E9 1792 aaKnown RBP12.29□□□□□ -0.44
CCM2-210ENST00000478169 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 TAF5LO75529 589 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
CCM2-210ENST00000478169 CFAP100Q494V2 611 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
CCM2-210ENST00000478169 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 FZD1Q9UP38 647 aa12.29□□□□□ -0.44
CCM2-210ENST00000478169 SSC5DA1L4H1 1573 aa12.28□□□□□ -0.44
CCM2-210ENST00000478169 SNAP23O00161 211 aa12.28□□□□□ -0.44
CCM2-210ENST00000478169 FOXO4P98177 505 aa12.28□□□□□ -0.44
CCM2-210ENST00000478169 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
CCM2-210ENST00000478169 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
CCM2-210ENST00000478169 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
CCM2-210ENST00000478169 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
CCM2-210ENST00000478169 F8W031 263 aaPredicted RBP12.27□□□□□ -0.45
CCM2-210ENST00000478169 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCM2-210ENST00000478169 VAMP4O75379 141 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.45
CCM2-210ENST00000478169 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 ANKRD13AQ8IZ07 590 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 ERO1AQ96HE7 468 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
CCM2-210ENST00000478169 CLRN2A0PK11 232 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
CCM2-210ENST00000478169 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCM2-210ENST00000478169 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 NBPF12Q5TAG4 269 aaPredicted RBP12.26□□□□□ -0.45
CCM2-210ENST00000478169 LMBR1LQ6UX01 489 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 WDR63Q8IWG1 891 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
CCM2-210ENST00000478169 RASA3Q14644 834 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 CCDC184Q52MB2 194 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.25□□□□□ -0.45
CCM2-210ENST00000478169 SERPINA10Q9UK55 444 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
CCM2-210ENST00000478169 GRM8O00222 908 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 PLIN1O60240 522 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 GJA5P36382 358 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 HTTP42858 3142 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 SP3Q02447 781 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 CRHR2Q13324 411 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 UBE4AQ14139 1066 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 MFSD14BQ5SR56 506 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
CCM2-210ENST00000478169 PTPN18Q99952 460 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 EFCC1Q9HA90 598 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
CCM2-210ENST00000478169 AOX1Q06278 1338 aa12.23□□□□□ -0.45
CCM2-210ENST00000478169 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
CCM2-210ENST00000478169 F6X3S4 739 aa12.23□□□□□ -0.45
CCM2-210ENST00000478169 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
CCM2-210ENST00000478169 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
CCM2-210ENST00000478169 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
CCM2-210ENST00000478169 ZNF594Q96JF6 807 aaPredicted RBP12.23□□□□□ -0.45
CCM2-210ENST00000478169 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
CCM2-210ENST00000478169 ZNF70Q9UC06 446 aaPredicted RBP12.23□□□□□ -0.45
CCM2-210ENST00000478169 TTF2Q9UNY4 1162 aaKnown RBP12.23□□□□□ -0.45
CCM2-210ENST00000478169 ALDH1L1O75891 902 aa12.22□□□□□ -0.45
CCM2-210ENST00000478169 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
CCM2-210ENST00000478169 TNNI2P48788 182 aa12.22□□□□□ -0.45
CCM2-210ENST00000478169 ARHGEF6Q15052 776 aa12.22□□□□□ -0.45
CCM2-210ENST00000478169 DZIP1LQ8IYY4 767 aaKnown RBP12.22□□□□□ -0.45
CCM2-210ENST00000478169 OPTNQ96CV9 577 aa12.22□□□□□ -0.45
CCM2-210ENST00000478169 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
CCM2-210ENST00000478169 FAM84BQ96KN1 310 aaPredicted RBP12.22□□□□□ -0.45
CCM2-210ENST00000478169 ELP3Q9H9T3 547 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms