RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 A0A1B0GUL7 405 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 SLC3A2P08195 630 aaKnown RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 DCPSQ96C86 337 aaKnown RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 LMBRD1Q9NUN5 540 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
SYCP3-204ENST00000478139 GLRX3O76003 335 aaKnown RBP9.09□□□□□ -0.95
SYCP3-204ENST00000478139 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 MFSD14BQ5SR56 506 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 CLEC17AQ6ZS10 378 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 ZSCAN30Q86W11 494 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 POLR3DP05423 398 aaPredicted RBP9.09□□□□□ -0.95
SYCP3-204ENST00000478139 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 RBSNQ9H1K0 784 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 GYG1P46976 350 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 NUCB2P80303 420 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 TRDNQ13061 729 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 SLC10A5Q5PT55 438 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 NAA16Q6N069 864 aaPredicted RBP9.09□□□□□ -0.95
SYCP3-204ENST00000478139 ATP10DQ9P241 1426 aa9.09□□□□□ -0.95
SYCP3-204ENST00000478139 PDE8BO95263 885 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 MSNP26038 577 aaKnown RBP9.08□□□□□ -0.96
SYCP3-204ENST00000478139 CEP85Q6P2H3 762 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 COA1Q9GZY4 146 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 ECHDC1Q9NTX5 307 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 HIP1O00291 1037 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 GOLIM4O00461 696 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 CYP2E1P05181 493 aaPredicted RBP9.08□□□□□ -0.96
SYCP3-204ENST00000478139 ATP2B2Q01814 1243 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 LRRC24Q50LG9 513 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 PUS3Q9BZE2 481 aaKnown RBP9.08□□□□□ -0.96
SYCP3-204ENST00000478139 ZNRF3Q9ULT6 936 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 MINPP1Q9UNW1 487 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 TTF2Q9UNY4 1162 aaKnown RBP9.08□□□□□ -0.96
SYCP3-204ENST00000478139 ADCY9O60503 1353 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 ZNF445P59923 1031 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 TSHZ3Q63HK5 1081 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 PODNQ7Z5L7 613 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 GPT2Q8TD30 523 aa9.08□□□□□ -0.96
SYCP3-204ENST00000478139 GPR101Q96P66 508 aaPredicted RBP9.08□□□□□ -0.96
SYCP3-204ENST00000478139 HLA-DOAP06340 250 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 CYP7A1P22680 504 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 TDO2P48775 406 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 ZDHHC9Q9Y397 364 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 IBTKQ9P2D0 1353 aaPredicted RBP9.07□□□□□ -0.96
SYCP3-204ENST00000478139 ST18O60284 1047 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 PLCG2P16885 1265 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 RASSF7Q02833 373 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 NOL8Q76FK4 1167 aaKnown RBP9.07□□□□□ -0.96
SYCP3-204ENST00000478139 XAGE2Q96GT9 111 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 A0A0U1RQG5 324 aaPredicted RBP9.07□□□□□ -0.96
SYCP3-204ENST00000478139 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
SYCP3-204ENST00000478139 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
SYCP3-204ENST00000478139 MARF1Q9Y4F3 1742 aaKnown RBP9.06□□□□□ -0.96
SYCP3-204ENST00000478139 ECE2O60344 883 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 MX1P20591 662 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 GPSM2P81274 684 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 TEKT1Q969V4 418 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 COL18A1P39060 1754 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 PNMA6EA0A0J9YXQ4 647 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 TPM2P07951 284 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
SYCP3-204ENST00000478139 HOOK2Q96ED9 719 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 RGPD2P0DJD1 1756 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 SYCE3A1L190 88 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 RBM10P98175 930 aaKnown RBP9.06□□□□□ -0.96
SYCP3-204ENST00000478139 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
SYCP3-204ENST00000478139 PICALMQ13492 652 aa9.06□□□□□ -0.96
SYCP3-204ENST00000478139 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 BCAMP50895 628 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 FOXD4L6Q3SYB3 417 aaPredicted RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 EPHA10Q5JZY3 1008 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 FOXD4L3Q6VB84 417 aaPredicted RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 RNF214Q8ND24 703 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 TBC1D16Q8TBP0 767 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 OFD1O75665 1012 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 SCNN1DP51172 638 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 PRKG1Q13976 671 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 TNNI3KQ59H18 835 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 RALYLQ86SE5 291 aaKnown RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 DBNDD2Q9BQY9 259 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 PLA2G12BQ9BX93 195 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 CRNKL1Q9BZJ0 848 aaKnown RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 HACL1Q9UJ83 578 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 R3HCC1Q9Y3T6 440 aaKnown RBP9.05□□□□□ -0.96
SYCP3-204ENST00000478139 FPGT-TNNI3KV9GXZ4 949 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 MRC1P22897 1456 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 ABCA3Q99758 1704 aa9.05□□□□□ -0.96
SYCP3-204ENST00000478139 DHX16O60231 1041 aaKnown RBP9.04□□□□□ -0.96
SYCP3-204ENST00000478139 CIAO1O76071 339 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms