RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 DMRTC2Q8IXT2 367 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 ANKRD13AQ8IZ07 590 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 DTWD1Q8N5C7 304 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 FBF1Q8TES7 1133 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 NXPE3Q969Y0 559 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 SPATA32Q96LK8 384 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 HHIPQ96QV1 700 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 BHLHE41Q9C0J9 482 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 LACRTQ9GZZ8 138 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 MUC3BQ9H195 1237 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 NLRP2Q9NX02 1062 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 A0A0A0MRY4 1105 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 GADD45BO75293 160 aaPredicted RBP4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 SPATA31C1P0DKV0 1188 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 COL8A1P27658 744 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 TRIM28Q13263 835 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 ALG1LQ6GMV1 187 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 CCNJLQ8IV13 435 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 CNPY4Q8N129 248 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 EPS8L3Q8TE67 593 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 ADAM19Q9H013 955 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 EHD4Q9H223 541 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 LIN7BQ9HAP6 207 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 SRA1Q9HD15 236 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 PRDM10Q9NQV6 1147 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 PPME1Q9Y570 386 aa4.76□□□□□ -1.65
FNDC3B-209ENST00000478016 ELNP15502 786 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 CABP4P57796 275 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 RASSF7Q02833 373 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 EAPPQ56P03 285 aaPredicted RBP4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 NPAS4Q8IUM7 802 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 MAP4K3Q8IVH8 894 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 FMR1NBQ8N0W7 255 aaPredicted RBP4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 GPATCH11Q8N954 259 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 ASAP3Q8TDY4 903 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 IPO4Q8TEX9 1081 aaKnown RBP4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 BSNDQ8WZ55 320 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 TCF12Q99081 682 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 TRAK1Q9UPV9 953 aa4.75□□□□□ -1.65
FNDC3B-209ENST00000478016 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 H3BRJ5 948 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 LDHBP07195 334 aaKnown RBP4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 EPHA1P21709 976 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 GSK3AP49840 483 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 FAM117BQ6P1L5 589 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 ADAMTSL4Q6UY14 1074 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 FBXO11Q86XK2 927 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 DCAF11Q8TEB1 546 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 WNT8BQ93098 351 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 DCAF5Q96JK2 942 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 SH2B1Q9NRF2 756 aaPredicted RBP4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 SOX13Q9UN79 622 aa4.74□□□□□ -1.65
FNDC3B-209ENST00000478016 A0A096LPE4 126 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 A0A1W2PPZ6 126 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 METTL12A8MUP2 240 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 LINC01387J3KSC0 135 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 DEAF1O75398 565 aaPredicted RBP4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 PRPF40AO75400 957 aaKnown RBP4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 GDF11O95390 407 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 PTMAP06454 111 aaKnown RBP4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 CDC25BP30305 580 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 GRM2Q14416 872 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 PRPF40BQ6NWY9 871 aaKnown RBP4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 PI16Q6UXB8 463 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 VN1R5Q7Z5H4 357 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 TMEM151AQ8N4L1 468 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 NACC1Q96RE7 527 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 SETDB2Q96T68 719 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 PPP4R2Q9NY27 417 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 WWC3Q9ULE0 1092 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 NAP1L2Q9ULW6 460 aaPredicted RBP4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 SPG7Q9UQ90 795 aa4.73□□□□□ -1.65
FNDC3B-209ENST00000478016 TMEM238LA0A1B0GVL6 79 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 GIPC1O14908 333 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 APBA3O96018 575 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 GRIA4P48058 902 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 PIP4K2BP78356 416 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 PTPN12Q05209 780 aaKnown RBP4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 IKBKEQ14164 716 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 SETDB1Q15047 1291 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 TXNDC11Q6PKC3 985 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 FAM43BQ6ZT52 329 aaPredicted RBP4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 TMTC2Q8N394 836 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 KLHL23Q8NBE8 558 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 ZNF526Q8TF50 670 aaPredicted RBP4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 SECISBP2LQ93073 1101 aaKnown RBP4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 FRMD6Q96NE9 622 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 BCO2Q9BYV7 579 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 SRCIN1Q9C0H9 1055 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 ABCB6Q9NP58 842 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 UNC13AQ9UPW8 1703 aa4.72□□□□□ -1.65
FNDC3B-209ENST00000478016 NACADO15069 1562 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 KRBA1A5PL33 1030 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 DLL1O00548 723 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 FSCN2O14926 492 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 EIF4EBP3O60516 100 aaPredicted RBP4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 XRCC5P13010 732 aaKnown RBP4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 ITPKAP23677 461 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 GNA15P30679 374 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms