RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CHRNDQ07001 517 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-205ENST00000477893 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 ZNF408Q9H9D4 720 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 ABT1Q9ULW3 272 aaKnown RBP10.46□□□□□ -0.73
ERCC8-205ENST00000477893 MED23Q9ULK4 1368 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 ZNF804BA4D1E1 1349 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 PTPRCP08575 1304 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 TMEM88BA6NKF7 163 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 EGFRP00533 1210 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 HIRAP54198 1017 aaPredicted RBP10.45□□□□□ -0.74
ERCC8-205ENST00000477893 LSM11P83369 360 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERCC8-205ENST00000477893 GRM1Q13255 1194 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 TXNRD3Q86VQ6 643 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 GLIS2Q9BZE0 524 aaPredicted RBP10.45□□□□□ -0.74
ERCC8-205ENST00000477893 CNNM1Q9NRU3 951 aa10.45□□□□□ -0.74
ERCC8-205ENST00000477893 DLK2Q6UY11 383 aa10.44□□□□□ -0.74
ERCC8-205ENST00000477893 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
ERCC8-205ENST00000477893 BICC1Q9H694 974 aaKnown RBP10.44□□□□□ -0.74
ERCC8-205ENST00000477893 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
ERCC8-205ENST00000477893 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
ERCC8-205ENST00000477893 JAG2Q9Y219 1238 aa10.44□□□□□ -0.74
ERCC8-205ENST00000477893 SCN9AQ15858 1988 aa10.44□□□□□ -0.74
ERCC8-205ENST00000477893 ASTN2O75129 1339 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-205ENST00000477893 RPS12P25398 132 aaKnown RBP10.43□□□□□ -0.74
ERCC8-205ENST00000477893 KIF4BQ2VIQ3 1234 aa10.43□□□□□ -0.74
ERCC8-205ENST00000477893 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
ERCC8-205ENST00000477893 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-205ENST00000477893 LDHAL6AQ6ZMR3 332 aa10.43□□□□□ -0.74
ERCC8-205ENST00000477893 USP48Q86UV5 1035 aa10.43□□□□□ -0.74
ERCC8-205ENST00000477893 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
ERCC8-205ENST00000477893 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
ERCC8-205ENST00000477893 CNTNAP1P78357 1384 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 USP17L3A6NCW0 530 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 USP17L4A6NCW7 530 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 CELF2O95319 508 aaKnown RBP10.42□□□□□ -0.74
ERCC8-205ENST00000477893 VIL1P09327 827 aaKnown RBP10.42□□□□□ -0.74
ERCC8-205ENST00000477893 USP17L1Q7RTZ2 530 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 KLHDC4Q8TBB5 520 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 DPF2Q92785 391 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
ERCC8-205ENST00000477893 SCAF8Q9UPN6 1271 aaKnown RBP10.42□□□□□ -0.74
ERCC8-205ENST00000477893 LEMD3Q9Y2U8 911 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 PCNTO95613 3336 aa10.42□□□□□ -0.74
ERCC8-205ENST00000477893 HSPA1AP0DMV8 641 aaKnown RBP10.41□□□□□ -0.74
ERCC8-205ENST00000477893 HSPA1BP0DMV9 641 aaKnown RBP10.41□□□□□ -0.74
ERCC8-205ENST00000477893 VEGFBP49765 207 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 RARSP54136 660 aaKnown RBP10.41□□□□□ -0.74
ERCC8-205ENST00000477893 GTF2IP78347 998 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 PODNQ7Z5L7 613 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 ANKRD44Q8N8A2 993 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
ERCC8-205ENST00000477893 COA1Q9GZY4 146 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 GGA3Q9NZ52 723 aa10.41□□□□□ -0.74
ERCC8-205ENST00000477893 UTYO14607 1347 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 A0A1B0GUL6 1792 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 SASH1O94885 1247 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
ERCC8-205ENST00000477893 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 DACT2Q5SW24 774 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 CST9Q5W186 159 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 KRT26Q7Z3Y9 468 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 DCPSQ96C86 337 aaKnown RBP10.4□□□□□ -0.74
ERCC8-205ENST00000477893 API5Q9BZZ5 524 aaKnown RBP10.4□□□□□ -0.74
ERCC8-205ENST00000477893 USP44Q9H0E7 712 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 MYOZ2Q9NPC6 264 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
ERCC8-205ENST00000477893 F8W031 263 aaPredicted RBP10.39□□□□□ -0.75
ERCC8-205ENST00000477893 BCAR3O75815 825 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 UBTFL1P0CB47 393 aaPredicted RBP10.39□□□□□ -0.75
ERCC8-205ENST00000477893 SCARF1Q14162 830 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 DEFB115Q30KQ5 88 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 LRRC24Q50LG9 513 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 METTL24Q5JXM2 366 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 ANGEL2Q5VTE6 544 aaKnown RBP10.39□□□□□ -0.75
ERCC8-205ENST00000477893 TTLL5Q6EMB2 1281 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 CDC37L1Q7L3B6 337 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
ERCC8-205ENST00000477893 KIAA0825Q8IV33 1275 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 AGBL3Q8NEM8 1001 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
ERCC8-205ENST00000477893 MS4A4AQ96JQ5 239 aa10.39□□□□□ -0.75
ERCC8-205ENST00000477893 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 GYG1P46976 350 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 ZNF280AP59817 542 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-205ENST00000477893 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-205ENST00000477893 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 GMLQ99445 158 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 SIL1Q9H173 461 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 CD209Q9NNX6 404 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
ERCC8-205ENST00000477893 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms