RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 MTMR14Q8NCE2 650 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 MED23Q9ULK4 1368 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 ZNF804BA4D1E1 1349 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 PPP2R1AP30153 589 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 GTF2A2P52657 109 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 KIF22Q14807 665 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 CCL15Q16663 113 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 ANKRD18AQ8IVF6 992 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 GDF15Q99988 308 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 ELP3Q9H9T3 547 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 MINPP1Q9UNW1 487 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 PCDHAC2Q9Y5I4 1007 aa9.6□□□□□ -0.87
SPTLC1-205ENST00000477888 EVI5O60447 810 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 FARP2O94887 1054 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 CCL5P13501 91 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 HSP90B1P14625 803 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 CTGFP29279 349 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 GRK4P32298 578 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 LRIT3Q3SXY7 679 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 PRMT6Q96LA8 375 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 RNF208Q9H0X6 261 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 CHPF2Q9P2E5 772 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 SRRDQ9UH36 339 aa9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 SPTBN5Q9NRC6 3674 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-205ENST00000477888 AOX1Q06278 1338 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 PDE8AO60658 829 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 SGPL1O95470 568 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 NEFMP07197 916 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 CCT4P50991 539 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 GTF2IP78347 998 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 RASA3Q14644 834 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 KRT24Q2M2I5 525 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 CERS5Q8N5B7 392 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 ZCCHC17Q9NP64 241 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 BSDC1Q9NW68 430 aaPredicted RBP9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 RIPOR2Q9Y4F9 1068 aa9.58□□□□□ -0.88
SPTLC1-205ENST00000477888 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 OSBPP22059 807 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 PSMC4P43686 418 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 C17orf99Q6UX52 265 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
SPTLC1-205ENST00000477888 BTBD19C9JJ37 291 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 MYO1BO43795 1136 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 WDHD1O75717 1129 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 PCCAP05165 728 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 KLRK1P26718 216 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 HOXD10P28358 340 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 BCAMP50895 628 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 VGLL4Q14135 290 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 CFAP100Q494V2 611 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 JARID2Q92833 1246 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 TEPSINQ96N21 525 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 DBF4Q9UBU7 674 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 CLSPNQ9HAW4 1339 aa9.56□□□□□ -0.88
SPTLC1-205ENST00000477888 PSME4Q14997 1843 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CETPP11597 493 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CAPN2P17655 700 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 UBXN2AP68543 259 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CDAN1Q8IWY9 1227 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CCDC191Q8NCU4 936 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CDC5LQ99459 802 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 CD209Q9NNX6 404 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 LAMB1P07942 1786 aa9.55□□□□□ -0.88
SPTLC1-205ENST00000477888 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 CHL1O00533 1208 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 TTLL11Q8NHH1 800 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 GUCD1Q96NT3 240 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 CPA4Q9UI42 421 aa9.54□□□□□ -0.88
SPTLC1-205ENST00000477888 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 IRF6O14896 467 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 FMNL1O95466 1100 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 HOXB7P09629 217 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 RIPK4P57078 832 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms