RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 A0A1W2PP55 124 aa8.78□□□□□ -1
VPS50-213ENST00000477572 ARL4DP49703 201 aa8.78□□□□□ -1
VPS50-213ENST00000477572 PDE4CQ08493 712 aa8.78□□□□□ -1
VPS50-213ENST00000477572 SPRED3Q2MJR0 410 aa8.78□□□□□ -1
VPS50-213ENST00000477572 WNT8BQ93098 351 aa8.78□□□□□ -1
VPS50-213ENST00000477572 BHLHE41Q9C0J9 482 aaPredicted RBP8.78□□□□□ -1
VPS50-213ENST00000477572 OSGEPQ9NPF4 335 aa8.78□□□□□ -1
VPS50-213ENST00000477572 USP26Q9BXU7 913 aa8.77□□□□□ -1.01
VPS50-213ENST00000477572 NIF3L1Q9GZT8 377 aa8.77□□□□□ -1.01
VPS50-213ENST00000477572 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
VPS50-213ENST00000477572 ARMC10Q8N2F6 343 aa8.76□□□□□ -1.01
VPS50-213ENST00000477572 UTP4Q969X6 686 aaKnown RBP8.76□□□□□ -1.01
VPS50-213ENST00000477572 RUSC1Q9BVN2 902 aa8.76□□□□□ -1.01
VPS50-213ENST00000477572 CEP41Q9BYV8 373 aa8.76□□□□□ -1.01
VPS50-213ENST00000477572 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
VPS50-213ENST00000477572 BIN2Q9UBW5 565 aaPredicted RBP8.76□□□□□ -1.01
VPS50-213ENST00000477572 GPR182O15218 404 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
VPS50-213ENST00000477572 GRIA4P48058 902 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 GSTM4Q03013 218 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 PDE3BQ13370 1112 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 FAM129BQ96TA1 746 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 TCF12Q99081 682 aa8.75□□□□□ -1.01
VPS50-213ENST00000477572 A0A096LPE4 126 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 A0A1W2PPZ6 126 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 FSTP19883 344 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 CCNJLQ8IV13 435 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 NPHS2Q9NP85 383 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 STOML1Q9UBI4 398 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 RAXQ9Y2V3 346 aa8.74□□□□□ -1.01
VPS50-213ENST00000477572 EIF1AYO14602 144 aaKnown RBP8.73□□□□□ -1.01
VPS50-213ENST00000477572 DHX15O43143 795 aaKnown RBP8.73□□□□□ -1.01
VPS50-213ENST00000477572 SART1O43290 800 aaKnown RBP8.73□□□□□ -1.01
VPS50-213ENST00000477572 CPNE3O75131 537 aaKnown RBP8.73□□□□□ -1.01
VPS50-213ENST00000477572 DLGAP3O95886 979 aa8.73□□□□□ -1.01
VPS50-213ENST00000477572 PREPP48147 710 aa8.73□□□□□ -1.01
VPS50-213ENST00000477572 FAM46AQ96IP4 442 aaKnown RBP8.73□□□□□ -1.01
VPS50-213ENST00000477572 RNF208Q9H0X6 261 aa8.73□□□□□ -1.01
VPS50-213ENST00000477572 EHD4Q9H223 541 aa8.73□□□□□ -1.01
VPS50-213ENST00000477572 NEFLP07196 543 aa8.72□□□□□ -1.01
VPS50-213ENST00000477572 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
VPS50-213ENST00000477572 ZNF423Q2M1K9 1284 aa8.72□□□□□ -1.01
VPS50-213ENST00000477572 FDX2Q6P4F2 183 aa8.72□□□□□ -1.01
VPS50-213ENST00000477572 LOC100289279A0A1B0GTE1 492 aa8.71□□□□□ -1.02
VPS50-213ENST00000477572 HMX2A2RU54 273 aa8.71□□□□□ -1.02
VPS50-213ENST00000477572 IGHA2P01877 340 aa8.71□□□□□ -1.02
VPS50-213ENST00000477572 TRIM42Q8IWZ5 723 aa8.71□□□□□ -1.02
VPS50-213ENST00000477572 CITED4Q96RK1 184 aa8.71□□□□□ -1.02
VPS50-213ENST00000477572 BRD1O95696 1058 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 BMP3P12645 472 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 ARTNQ5T4W7 220 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 NUTM2GQ5VZR2 741 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 C12orf50Q8NA57 414 aaPredicted RBP8.7□□□□□ -1.02
VPS50-213ENST00000477572 CCDC74AQ96AQ1 378 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 MYRFLQ96LU7 910 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 CLEC4MQ9H2X3 399 aaPredicted RBP8.7□□□□□ -1.02
VPS50-213ENST00000477572 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 ZFP64Q9NPA5 681 aa8.7□□□□□ -1.02
VPS50-213ENST00000477572 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
VPS50-213ENST00000477572 DRD2P14416 443 aa8.69□□□□□ -1.02
VPS50-213ENST00000477572 KIAA0319Q5VV43 1072 aa8.69□□□□□ -1.02
VPS50-213ENST00000477572 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
VPS50-213ENST00000477572 EPS8L3Q8TE67 593 aaKnown RBP8.69□□□□□ -1.02
VPS50-213ENST00000477572 GAS2O43903 313 aaKnown RBP8.68□□□□□ -1.02
VPS50-213ENST00000477572 TMC7Q7Z402 723 aa8.68□□□□□ -1.02
VPS50-213ENST00000477572 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
VPS50-213ENST00000477572 RBCK1Q9BYM8 510 aa8.68□□□□□ -1.02
VPS50-213ENST00000477572 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
VPS50-213ENST00000477572 GNEQ9Y223 722 aaKnown RBP8.68□□□□□ -1.02
VPS50-213ENST00000477572 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
VPS50-213ENST00000477572 SSTR4P31391 388 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 LRP8Q14114 963 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 UVSSAQ2YD98 709 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 PI16Q6UXB8 463 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 BEND4Q6ZU67 534 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 CSRNP1Q96S65 589 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 TMPRSS13Q9BYE2 586 aa8.67□□□□□ -1.02
VPS50-213ENST00000477572 MEGF11A6BM72 1044 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 ECEL1O95672 775 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 CTSBP07858 339 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 MAOBP27338 520 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 MAPK1P28482 360 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 ZNF157P51786 506 aaPredicted RBP8.66□□□□□ -1.02
VPS50-213ENST00000477572 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
VPS50-213ENST00000477572 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 DNAJC25Q9H1X3 360 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 RNF112Q9ULX5 631 aa8.66□□□□□ -1.02
VPS50-213ENST00000477572 RXRBP28702 533 aa8.65□□□□□ -1.02
VPS50-213ENST00000477572 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
VPS50-213ENST00000477572 ABCB6Q9NP58 842 aa8.65□□□□□ -1.02
VPS50-213ENST00000477572 DCTN4Q9UJW0 460 aa8.65□□□□□ -1.02
VPS50-213ENST00000477572 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.02
VPS50-213ENST00000477572 TGFB1P01137 390 aa8.64□□□□□ -1.03
VPS50-213ENST00000477572 MAP4P27816 1152 aaKnown RBP8.64□□□□□ -1.03
VPS50-213ENST00000477572 NFIAQ12857 509 aa8.64□□□□□ -1.03
VPS50-213ENST00000477572 GRM2Q14416 872 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms