RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 AK5Q9Y6K8 562 aa5.68□□□□□ -1.5
TARDBP-208ENST00000477447 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 H3BRJ5 948 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 LINC01387J3KSC0 135 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 ITPKAP23677 461 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 RBM25P49756 843 aaKnown RBP5.67□□□□□ -1.5
TARDBP-208ENST00000477447 VN1R5Q7Z5H4 357 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 BEND7Q8N7W2 519 aaPredicted RBP5.67□□□□□ -1.5
TARDBP-208ENST00000477447 SCARF2Q96GP6 870 aaPredicted RBP5.67□□□□□ -1.5
TARDBP-208ENST00000477447 CARD10Q9BWT7 1032 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 PLVAPQ9BX97 442 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 ZNF576Q9H609 170 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 AKAP2Q9Y2D5 859 aa5.67□□□□□ -1.5
TARDBP-208ENST00000477447 SPDYE3A6NKU9 549 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 XRCC5P13010 732 aaKnown RBP5.66□□□□□ -1.5
TARDBP-208ENST00000477447 ITGAEP38570 1179 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 RAC1P63000 192 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 PCDH1Q08174 1060 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 IKBKEQ14164 716 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 FAM117BQ6P1L5 589 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 CLEC4MQ9H2X3 399 aaPredicted RBP5.66□□□□□ -1.5
TARDBP-208ENST00000477447 NOP53Q9NZM5 478 aaKnown RBP5.66□□□□□ -1.5
TARDBP-208ENST00000477447 STK17AQ9UEE5 414 aa5.66□□□□□ -1.5
TARDBP-208ENST00000477447 TTF2Q9UNY4 1162 aaKnown RBP5.66□□□□□ -1.5
TARDBP-208ENST00000477447 A0A0A0MRY4 1105 aa5.65□□□□□ -1.5
TARDBP-208ENST00000477447 UNCXA6NJT0 531 aa5.65□□□□□ -1.5
TARDBP-208ENST00000477447 FBXO24O75426 580 aa5.65□□□□□ -1.5
TARDBP-208ENST00000477447 ESRRAP11474 423 aaPredicted RBP5.65□□□□□ -1.5
TARDBP-208ENST00000477447 PTPN12Q05209 780 aaKnown RBP5.65□□□□□ -1.5
TARDBP-208ENST00000477447 MRPL58Q14197 206 aaKnown RBP5.65□□□□□ -1.5
TARDBP-208ENST00000477447 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.5
TARDBP-208ENST00000477447 GPN3Q9UHW5 284 aaPredicted RBP5.65□□□□□ -1.5
TARDBP-208ENST00000477447 FSCN2O14926 492 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 PIP4K2BP78356 416 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 HGSNATQ68CP4 663 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 TPTE2Q6XPS3 522 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 FMR1NBQ8N0W7 255 aaPredicted RBP5.64□□□□□ -1.51
TARDBP-208ENST00000477447 DTWD1Q8N5C7 304 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 CRELD1Q96HD1 420 aa5.64□□□□□ -1.51
TARDBP-208ENST00000477447 SRA1Q9HD15 236 aaKnown RBP5.64□□□□□ -1.51
TARDBP-208ENST00000477447 RNF225M0QZC1 329 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-208ENST00000477447 DEAF1O75398 565 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-208ENST00000477447 B3GALT4O96024 378 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 CTSHP09668 335 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 ARL4DP49703 201 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 ZNF157P51786 506 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-208ENST00000477447 C19orf57Q0VDD7 668 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 FAAP100Q0VG06 881 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 TRIM28Q13263 835 aaKnown RBP5.63□□□□□ -1.51
TARDBP-208ENST00000477447 SETDB1Q15047 1291 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 ZNF423Q2M1K9 1284 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 TSNAXIP1Q2TAA8 658 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 RPS26P11Q5JNZ5 115 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-208ENST00000477447 MEI1Q5TIA1 1274 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 MAP4K3Q8IVH8 894 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 ZFYVE1Q9HBF4 777 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 SEC31BQ9NQW1 1179 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 PPM1HQ9ULR3 514 aa5.63□□□□□ -1.51
TARDBP-208ENST00000477447 SOX1O00570 391 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-208ENST00000477447 COL8A1P27658 744 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 NLRP12P59046 1061 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 GSTM4Q03013 218 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 ILDR2Q71H61 639 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 FBXO11Q86XK2 927 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 GALNT11Q8NCW6 608 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 WNT8BQ93098 351 aa5.62□□□□□ -1.51
TARDBP-208ENST00000477447 KIAA1522Q9P206 1035 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-208ENST00000477447 RECKO95980 971 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 SPATA31C1P0DKV0 1188 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 ELNP15502 786 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 FOXD4L6Q3SYB3 417 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-208ENST00000477447 FOXD4L3Q6VB84 417 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-208ENST00000477447 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 DDX54Q8TDD1 881 aaKnown RBP5.61□□□□□ -1.51
TARDBP-208ENST00000477447 DCAF11Q8TEB1 546 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 CEP44Q9C0F1 390 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-208ENST00000477447 OSGEPQ9NPF4 335 aa5.61□□□□□ -1.51
TARDBP-208ENST00000477447 ENC1O14682 589 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 CELA3AP09093 270 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 VAMP1P23763 118 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 CD68P34810 354 aaPredicted RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 PPP2R3AQ06190 1150 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 SUZ12Q15022 739 aaKnown RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 TAF1CQ15572 869 aaPredicted RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 CCDC85BQ15834 202 aaPredicted RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 GRIK4Q16099 956 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 TMEM87AQ8NBN3 555 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 UBASH3BQ8TF42 649 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 NECAB3Q96P71 396 aaPredicted RBP5.6□□□□□ -1.51
TARDBP-208ENST00000477447 TMEM39AQ9NV64 488 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 KCNK4Q9NYG8 393 aa5.6□□□□□ -1.51
TARDBP-208ENST00000477447 DLL1O00548 723 aa5.59□□□□□ -1.51
TARDBP-208ENST00000477447 ADAM11O75078 769 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms