RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 CHST3Q7LGC8 479 aa18.52■□□□□ 0.56
LINC00996-201ENST00000477392 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
LINC00996-201ENST00000477392 DDX11Q96FC9 970 aa18.52■□□□□ 0.56
LINC00996-201ENST00000477392 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.55
LINC00996-201ENST00000477392 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.55
LINC00996-201ENST00000477392 TRIM44Q96DX7 344 aaPredicted RBP18.52■□□□□ 0.55
LINC00996-201ENST00000477392 NIP7Q9Y221 180 aaKnown RBP eCLIP18.52■□□□□ 0.55
LINC00996-201ENST00000477392 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.55
LINC00996-201ENST00000477392 SLC9C2Q5TAH2 1124 aa18.51■□□□□ 0.55
LINC00996-201ENST00000477392 MB21D2Q8IYB1 491 aaPredicted RBP18.51■□□□□ 0.55
LINC00996-201ENST00000477392 RNF214Q8ND24 703 aa18.51■□□□□ 0.55
LINC00996-201ENST00000477392 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
LINC00996-201ENST00000477392 PTPDC1A2A3K4 754 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 ESPNB1AK53 854 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
LINC00996-201ENST00000477392 EVCP57679 992 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 ZNF274Q96GC6 653 aaPredicted RBP18.5■□□□□ 0.55
LINC00996-201ENST00000477392 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 TCRBV5S4A2TA0A5A2 114 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 SNAP23O00161 211 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 SLC5A1P13866 664 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
LINC00996-201ENST00000477392 NBPF3Q9H094 633 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 NCOA5Q9HCD5 579 aaKnown RBP18.5■□□□□ 0.55
LINC00996-201ENST00000477392 GPHNQ9NQX3 736 aaPredicted RBP18.5■□□□□ 0.55
LINC00996-201ENST00000477392 WWC3Q9ULE0 1092 aa18.5■□□□□ 0.55
LINC00996-201ENST00000477392 IDH1O75874 414 aaKnown RBP18.49■□□□□ 0.55
LINC00996-201ENST00000477392 PDE6AP16499 860 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 ANTXR2P58335 489 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
LINC00996-201ENST00000477392 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 LINC00116Q8NCU8 138 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 TOM1O60784 492 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
LINC00996-201ENST00000477392 HMGN5P82970 282 aaKnown RBP18.49■□□□□ 0.55
LINC00996-201ENST00000477392 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
LINC00996-201ENST00000477392 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
LINC00996-201ENST00000477392 C4BP0C0L5 1744 aa18.48■□□□□ 0.55
LINC00996-201ENST00000477392 CLCN1P35523 988 aa18.48■□□□□ 0.55
LINC00996-201ENST00000477392 RASGRF1Q13972 1273 aa18.48■□□□□ 0.55
LINC00996-201ENST00000477392 CHD4Q14839 1912 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 H3BQV1 296 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 PRC1O43663 620 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 NAA16Q6N069 864 aaPredicted RBP18.47■□□□□ 0.55
LINC00996-201ENST00000477392 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 LEO1Q8WVC0 666 aaPredicted RBP18.47■□□□□ 0.55
LINC00996-201ENST00000477392 FUCA2Q9BTY2 467 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 SCAND2PQ9GZW5 306 aaPredicted RBP18.47■□□□□ 0.55
LINC00996-201ENST00000477392 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
LINC00996-201ENST00000477392 TAF1P21675 1872 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 SPATA32Q96LK8 384 aa18.47■□□□□ 0.55
LINC00996-201ENST00000477392 BTAF1O14981 1849 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 WDR19Q8NEZ3 1342 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 ZNF213O14771 459 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 MCM5P33992 734 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 VPS72Q15906 364 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 NCOA7Q8NI08 942 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 ZSCAN16Q9H4T2 348 aaPredicted RBP18.46■□□□□ 0.55
LINC00996-201ENST00000477392 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
LINC00996-201ENST00000477392 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
LINC00996-201ENST00000477392 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
LINC00996-201ENST00000477392 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 TBC1D10CQ8IV04 446 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 LIG1P18858 919 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 NKX2-3Q8TAU0 364 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 HPS5Q9UPZ3 1129 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 TIAM2Q8IVF5 1701 aa18.45■□□□□ 0.54
LINC00996-201ENST00000477392 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 FOSBP53539 338 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 RALYLQ86SE5 291 aaKnown RBP18.44■□□□□ 0.54
LINC00996-201ENST00000477392 STRBPQ96SI9 672 aaKnown RBP18.44■□□□□ 0.54
LINC00996-201ENST00000477392 DENND2AQ9ULE3 1009 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
LINC00996-201ENST00000477392 ADD1P35611 737 aaKnown RBP18.44■□□□□ 0.54
LINC00996-201ENST00000477392 KCNQ4P56696 695 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 CHRNDQ07001 517 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
LINC00996-201ENST00000477392 ZMYM6O95789 1325 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 KLF18A0A0U1RQI7 1052 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 PPFIA3O75145 1194 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 BCAMP50895 628 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 ERFEQ4G0M1 354 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 PGBD1Q96JS3 809 aa18.43■□□□□ 0.54
LINC00996-201ENST00000477392 ALX1Q15699 326 aa18.42■□□□□ 0.54
LINC00996-201ENST00000477392 HS1BP3Q53T59 392 aa18.42■□□□□ 0.54
LINC00996-201ENST00000477392 MAGEB6Q8N7X4 407 aa18.42■□□□□ 0.54
LINC00996-201ENST00000477392 AIDAQ96BJ3 306 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms