RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 C1orf127Q8N9H9 656 aa7.9□□□□□ -1.14
PIKFYVE-209ENST00000477200 SOX13Q9UN79 622 aa7.9□□□□□ -1.14
PIKFYVE-209ENST00000477200 PDE2AO00408 941 aaPredicted RBP7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 JAG1P78504 1218 aa7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 ATCAYQ86WG3 371 aa7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 ABTB2Q8N961 1025 aa7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 TMPRSS13Q9BYE2 586 aa7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 ANGEL1Q9UNK9 670 aaKnown RBP7.89□□□□□ -1.15
PIKFYVE-209ENST00000477200 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 RXRBP28702 533 aa7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 C19orf57Q0VDD7 668 aa7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 COL19A1Q14993 1142 aa7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 C12orf50Q8NA57 414 aaPredicted RBP7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 GIMAP7Q8NHV1 300 aa7.88□□□□□ -1.15
PIKFYVE-209ENST00000477200 TIAF1O95411 115 aa7.87□□□□□ -1.15
PIKFYVE-209ENST00000477200 DLGAP3O95886 979 aa7.87□□□□□ -1.15
PIKFYVE-209ENST00000477200 PRNPP04156 253 aa7.87□□□□□ -1.15
PIKFYVE-209ENST00000477200 ARL4DP49703 201 aa7.87□□□□□ -1.15
PIKFYVE-209ENST00000477200 NUTM2GQ5VZR2 741 aa7.87□□□□□ -1.15
PIKFYVE-209ENST00000477200 CES1P23141 567 aa7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 NFKBIBQ15653 356 aa7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 XKR5Q6UX68 686 aa7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
PIKFYVE-209ENST00000477200 FAM95CA0A1B0GW59 222 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 A6NHS1 94 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 DRD2P14416 443 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 CPSF6Q16630 551 aaKnown RBP eCLIP7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 TMEM164Q5U3C3 297 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 VN1R5Q7Z5H4 357 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 TMEM102Q8N9M5 508 aaPredicted RBP7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 CHRDQ9H2X0 955 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 SUGCTQ9HAC7 445 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 SLAIN2Q9P270 581 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 SEPT3Q9UH03 358 aa7.85□□□□□ -1.15
PIKFYVE-209ENST00000477200 LOC100289279A0A1B0GTE1 492 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 C8AP07357 584 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 ADMP35318 185 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 TP53INP2Q8IXH6 220 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 FBLIM1Q8WUP2 373 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 FBXL18Q96ME1 805 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 USP26Q9BXU7 913 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 CYP4F12Q9HCS2 524 aa7.84□□□□□ -1.15
PIKFYVE-209ENST00000477200 ITGB5P18084 799 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 IKBKEQ14164 716 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 VSIG10LQ86VR7 867 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 POU5F2Q8N7G0 328 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 BSNDQ8WZ55 320 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 EDEM1Q92611 657 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 CLP1Q92989 425 aaKnown RBP7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 ASIC4Q96FT7 647 aa7.83□□□□□ -1.16
PIKFYVE-209ENST00000477200 CYP26A1O43174 497 aa7.82□□□□□ -1.16
PIKFYVE-209ENST00000477200 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
PIKFYVE-209ENST00000477200 OSMRQ99650 979 aa7.82□□□□□ -1.16
PIKFYVE-209ENST00000477200 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 ATG7O95352 703 aa7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 RPLP1P05386 114 aaKnown RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 USP11P51784 963 aa7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 EXOSC6Q5RKV6 272 aaKnown RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 C2CD4AQ8NCU7 369 aaPredicted RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 ZKSCAN3Q9BRR0 538 aa7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 KRTAP4-9Q9BYQ8 210 aa7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
PIKFYVE-209ENST00000477200 FAM170BA6NMN3 283 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 PDGFAP04085 211 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 C8orf34Q49A92 452 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 ZAR1Q86SH2 424 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 EZH1Q92800 747 aaPredicted RBP7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 GATA6Q92908 595 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 PMEPA1Q969W9 287 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 TBC1D32Q96NH3 1257 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 METTL22Q9BUU2 404 aaPredicted RBP7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
PIKFYVE-209ENST00000477200 EREGO14944 169 aa7.79□□□□□ -1.16
PIKFYVE-209ENST00000477200 SOX17Q9H6I2 414 aaPredicted RBP7.79□□□□□ -1.16
PIKFYVE-209ENST00000477200 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
PIKFYVE-209ENST00000477200 ESRRAP11474 423 aaPredicted RBP7.78□□□□□ -1.16
PIKFYVE-209ENST00000477200 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
PIKFYVE-209ENST00000477200 SOX4Q06945 474 aaPredicted RBP7.78□□□□□ -1.16
PIKFYVE-209ENST00000477200 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
PIKFYVE-209ENST00000477200 ASAP3Q8TDY4 903 aa7.77□□□□□ -1.17
PIKFYVE-209ENST00000477200 ZC3H7BQ9UGR2 993 aaKnown RBP7.77□□□□□ -1.17
PIKFYVE-209ENST00000477200 PCSK2P16519 638 aa7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 ATP2B4P23634 1241 aa7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 MZF1P28698 734 aaPredicted RBP7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 NOM1Q5C9Z4 860 aaKnown RBP7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 HELQQ8TDG4 1101 aa7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 NRSN2Q9GZP1 204 aa7.76□□□□□ -1.17
PIKFYVE-209ENST00000477200 GSTM4Q03013 218 aa7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 AGBL5Q8NDL9 886 aa7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 BHLHE41Q9C0J9 482 aaPredicted RBP7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 ACTL7BQ9Y614 415 aa7.75□□□□□ -1.17
PIKFYVE-209ENST00000477200 NFICP08651 508 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms