RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 AS3MTQ9HBK9 375 aa7.58□□□□□ -1.2
TTC3-215ENST00000476784 WDR33Q9C0J8 1336 aaKnown RBP7.57□□□□□ -1.2
TTC3-215ENST00000476784 EIF4E1BA6NMX2 242 aaKnown RBP7.57□□□□□ -1.2
TTC3-215ENST00000476784 BNIP3LO60238 219 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 SPDYE1Q8NFV5 336 aaPredicted RBP7.57□□□□□ -1.2
TTC3-215ENST00000476784 RPS6KC1Q96S38 1066 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 CLIP2Q9UDT6 1046 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 AFMP43652 599 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 UAP1Q16222 522 aaPredicted RBP7.57□□□□□ -1.2
TTC3-215ENST00000476784 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 ZSCAN31Q96LW9 406 aaPredicted RBP7.57□□□□□ -1.2
TTC3-215ENST00000476784 C6orf163Q5TEZ5 329 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 ESR2Q92731 530 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 BIN1O00499 593 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 TMCO3Q6UWJ1 677 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 ALDH1B1P30837 517 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 GSE1Q14687 1217 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 HS2ST1Q7LGA3 356 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 MAATS1Q7Z4T9 603 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 MAGEB6Q8N7X4 407 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 FAM204AQ9H8W3 233 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.57□□□□□ -1.24e-7■■□□□ 12.7
TTC3-215ENST00000476784 CD109Q6YHK3 1445 aa7.57□□□□□ -1.2
TTC3-215ENST00000476784 IRS4O14654 1257 aaPredicted RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 SEC24BO95487 1268 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 ELF1P32519 619 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 SMTNP53814 917 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 PLIN2Q99541 437 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 TYW5A2RUC4 315 aaKnown RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 CASQ1P31415 396 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 KCNG4Q8TDN1 519 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 ATRIPQ8WXE1 791 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 PDZRN3Q9UPQ7 1066 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 DCAF17Q5H9S7 520 aaPredicted RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 TMTC4Q5T4D3 741 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 RNF217Q8TC41 542 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 DPYSL4O14531 572 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 YARSP54577 528 aaKnown RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 ASIC1P78348 528 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 TTC22Q5TAA0 569 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 ANKRD35Q8N283 1001 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 NCOA7Q8NI08 942 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 OSBPP22059 807 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
TTC3-215ENST00000476784 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 RETREG2Q8NC44 543 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 WDR48Q8TAF3 677 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 USP25Q9UHP3 1055 aa7.56□□□□□ -1.2
TTC3-215ENST00000476784 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 MBD3O95983 291 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 TOP1P11387 765 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 SEPT6Q14141 434 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 C2orf69Q8N8R5 385 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 GOLGA6L9A6NEM1 432 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 PGBD3Q8N328 593 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 MYOM3Q5VTT5 1437 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 GNAQP50148 359 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 SFMBT1Q9UHJ3 866 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 ANKRD30BQ9BXX2 1392 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 DOK7Q18PE1 504 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 ARHGEF16Q5VV41 709 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 JADE2Q9NQC1 790 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 M0R2C6 588 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 CAPN9O14815 690 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 SLC4A1P02730 911 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 HMGB1P09429 215 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 PARP1P09874 1014 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 XAGE3Q8WTP9 111 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 RAD50Q92878 1312 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 TESPA1A2RU30 521 aaPredicted RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 STK10O94804 968 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 VIMP08670 466 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 ZNF449Q6P9G9 518 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 ATP6V0A2Q9Y487 856 aa7.55□□□□□ -1.2
TTC3-215ENST00000476784 BZW2Q9Y6E2 419 aaKnown RBP7.55□□□□□ -1.2
TTC3-215ENST00000476784 IFI16Q16666 785 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 RTN1Q16799 776 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 KRT79Q5XKE5 535 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 RPUSD2Q8IZ73 545 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 EPRSP07814 1512 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 PPP2R1AP30153 589 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 NAA15Q9BXJ9 866 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 SUDS3Q9H7L9 328 aaPredicted RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 STIM2Q9P246 746 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms