RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
TMEM53-208ENST00000476724 FAM196AQ6ZSG2 479 aa19.41■□□□□ 0.7
TMEM53-208ENST00000476724 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
TMEM53-208ENST00000476724 TRIM37O94972 964 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 TTC39AQ5SRH9 613 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 STOX1Q6ZVD7 989 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 SMARCC2Q8TAQ2 1214 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 BRF1Q92994 677 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 CTNNA3Q9UI47 895 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 RIC1Q4ADV7 1423 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 MAST3O60307 1309 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 HMGN5P82970 282 aaKnown RBP19.4■□□□□ 0.7
TMEM53-208ENST00000476724 NARFQ9UHQ1 456 aa19.4■□□□□ 0.7
TMEM53-208ENST00000476724 RTCBQ9Y3I0 505 aaKnown RBP19.4■□□□□ 0.7
TMEM53-208ENST00000476724 LDHAL6AQ6ZMR3 332 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 XAGE2Q96GT9 111 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 SPATA32Q96LK8 384 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 RIPOR2Q9Y4F9 1068 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 DTNBO60941 627 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 OFD1O75665 1012 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 RBM6P78332 1123 aaKnown RBP19.39■□□□□ 0.69
TMEM53-208ENST00000476724 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
TMEM53-208ENST00000476724 FBXL16Q8N461 479 aa19.39■□□□□ 0.69
TMEM53-208ENST00000476724 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
TMEM53-208ENST00000476724 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.39■□□□□ 0.69
TMEM53-208ENST00000476724 GOLGA6L4A6NEF3 574 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 E7EWF7 191 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 H3BQV1 296 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 SCRN1Q12765 414 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-208ENST00000476724 AK7Q96M32 723 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 SEC31BQ9NQW1 1179 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 COL4A1P02462 1669 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 LRP5O75197 1615 aa19.38■□□□□ 0.69
TMEM53-208ENST00000476724 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM53-208ENST00000476724 GIMAP6Q6P9H5 292 aa19.37■□□□□ 0.69
TMEM53-208ENST00000476724 ZNF274Q96GC6 653 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-208ENST00000476724 CFAP45Q9UL16 551 aa19.37■□□□□ 0.69
TMEM53-208ENST00000476724 JAK2O60674 1132 aa19.37■□□□□ 0.69
TMEM53-208ENST00000476724 PTMAP06454 111 aaKnown RBP19.37■□□□□ 0.69
TMEM53-208ENST00000476724 ERFEQ4G0M1 354 aa19.37■□□□□ 0.69
TMEM53-208ENST00000476724 NAA16Q6N069 864 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-208ENST00000476724 LEO1Q8WVC0 666 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-208ENST00000476724 CNNM1Q9NRU3 951 aa19.37■□□□□ 0.69
TMEM53-208ENST00000476724 ADORA1P30542 326 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 RESTQ13127 1097 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 TPRNQ4KMQ1 711 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 COL24A1Q17RW2 1714 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 METTL24Q5JXM2 366 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 OSBP2Q969R2 916 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 NUP62CLQ9H1M0 184 aa19.36■□□□□ 0.69
TMEM53-208ENST00000476724 DDX19AQ9NUU7 478 aaKnown RBP19.36■□□□□ 0.69
TMEM53-208ENST00000476724 TAF1P21675 1872 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 M0R2C6 588 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 KDM4AO75164 1064 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 ZPR1O75312 459 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 SLFNL1Q499Z3 407 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 FAM173BQ6P4H8 233 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 C3orf67Q6ZVT6 689 aa19.35■□□□□ 0.69
TMEM53-208ENST00000476724 ZNF512BQ96KM6 892 aaPredicted RBP19.35■□□□□ 0.69
TMEM53-208ENST00000476724 ATL3Q6DD88 541 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 VGLL2Q8N8G2 317 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
TMEM53-208ENST00000476724 APPBP2Q92624 585 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 TFIP11Q9UBB9 837 aaKnown RBP19.34■□□□□ 0.69
TMEM53-208ENST00000476724 TERF1P54274 439 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 EVCP57679 992 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 IMMTQ16891 758 aaKnown RBP19.34■□□□□ 0.69
TMEM53-208ENST00000476724 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
TMEM53-208ENST00000476724 RGL2O15211 777 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 APOBRQ0VD83 1088 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 ATP2B3Q16720 1220 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 WASHC4Q2M389 1173 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 ZSCAN25Q6NSZ9 544 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 DDX11Q96FC9 970 aa19.33■□□□□ 0.69
TMEM53-208ENST00000476724 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.33■□□□□ 0.69
TMEM53-208ENST00000476724 ADCY5O95622 1261 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 TRAPPC3LQ5T215 181 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 MYH7P12883 1935 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 TPM2P07951 284 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 LIG1P18858 919 aa19.32■□□□□ 0.68
TMEM53-208ENST00000476724 TTF1Q15361 905 aaPredicted RBP19.32■□□□□ 0.68
TMEM53-208ENST00000476724 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
TMEM53-208ENST00000476724 PTPDC1A2A3K4 754 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 PDIA3P30101 505 aaKnown RBP19.31■□□□□ 0.68
TMEM53-208ENST00000476724 RFC4P35249 363 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 ZAP70P43403 619 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 RBM43Q6ZSC3 357 aaKnown RBP19.31■□□□□ 0.68
TMEM53-208ENST00000476724 PROM2Q8N271 834 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 SETDB2Q96T68 719 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms