RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SUPT20HL1Q3ZLR7 823 aa21.12■□□□□ 0.97
APOBEC3F-203ENST00000476513 MPHOSPH8Q99549 860 aa21.12■□□□□ 0.97
APOBEC3F-203ENST00000476513 PLA2G12BQ9BX93 195 aa21.12■□□□□ 0.97
APOBEC3F-203ENST00000476513 EFCC1Q9HA90 598 aa21.12■□□□□ 0.97
APOBEC3F-203ENST00000476513 CLRN2A0PK11 232 aa21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 FXR1P51114 621 aaKnown RBP eCLIP21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 CHRNDQ07001 517 aa21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 NBPF12Q5TAG4 269 aaPredicted RBP21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 OTUD7BQ6GQQ9 843 aa21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 PTPN18Q99952 460 aa21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 HTTP42858 3142 aa21.11■□□□□ 0.97
APOBEC3F-203ENST00000476513 IRS2Q9Y4H2 1338 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 MYH3P11055 1940 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 SPDYE2BA6NHP3 402 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 SNAP23O00161 211 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 USP2O75604 605 aaPredicted RBP21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 SPDYE6P0CI01 402 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 SP3Q02447 781 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 CFAP100Q494V2 611 aa21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 PRMT6Q96LA8 375 aaPredicted RBP21.1■□□□□ 0.97
APOBEC3F-203ENST00000476513 AOX1Q06278 1338 aa21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 F8W031 263 aaPredicted RBP21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 MYO1BO43795 1136 aa21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 CSF1RP07333 972 aa21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 IREB2P48200 963 aaKnown RBP21.09■□□□□ 0.97
APOBEC3F-203ENST00000476513 RBBP6Q7Z6E9 1792 aaKnown RBP21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 CASP7P55210 303 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 DDX10Q13206 875 aaKnown RBP21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 GCKRQ14397 625 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 C15orf52Q6ZUT6 534 aaKnown RBP21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 G2E3Q7L622 706 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 ANKRD13AQ8IZ07 590 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 STK31Q9BXU1 1019 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 VEZTQ9HBM0 779 aa21.08■□□□□ 0.97
APOBEC3F-203ENST00000476513 LAMB1P07942 1786 aa21.08■□□□□ 0.96
APOBEC3F-203ENST00000476513 MKI67P46013 3256 aaKnown RBP21.07■□□□□ 0.96
APOBEC3F-203ENST00000476513 TAF5LO75529 589 aa21.07■□□□□ 0.96
APOBEC3F-203ENST00000476513 RASA3Q14644 834 aa21.07■□□□□ 0.96
APOBEC3F-203ENST00000476513 TMEM106CQ9BVX2 250 aa21.07■□□□□ 0.96
APOBEC3F-203ENST00000476513 IL1R1P14778 569 aa21.06■□□□□ 0.96
APOBEC3F-203ENST00000476513 HELBQ8NG08 1087 aaPredicted RBP21.06■□□□□ 0.96
APOBEC3F-203ENST00000476513 ZNF333Q96JL9 665 aa21.06■□□□□ 0.96
APOBEC3F-203ENST00000476513 FKBP1AP62942 108 aaKnown RBP21.05■□□□□ 0.96
APOBEC3F-203ENST00000476513 OPTNQ96CV9 577 aa21.05■□□□□ 0.96
APOBEC3F-203ENST00000476513 MS4A4AQ96JQ5 239 aa21.05■□□□□ 0.96
APOBEC3F-203ENST00000476513 ELP3Q9H9T3 547 aa21.05■□□□□ 0.96
APOBEC3F-203ENST00000476513 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
APOBEC3F-203ENST00000476513 ZNF804AQ7Z570 1209 aa21.04■□□□□ 0.96
APOBEC3F-203ENST00000476513 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
APOBEC3F-203ENST00000476513 COLQQ9Y215 455 aaPredicted RBP21.04■□□□□ 0.96
APOBEC3F-203ENST00000476513 JAG2Q9Y219 1238 aa21.04■□□□□ 0.96
APOBEC3F-203ENST00000476513 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
APOBEC3F-203ENST00000476513 RBM5P52756 815 aaKnown RBP eCLIP21.03■□□□□ 0.96
APOBEC3F-203ENST00000476513 PTCH2Q9Y6C5 1203 aa21.03■□□□□ 0.96
APOBEC3F-203ENST00000476513 SLC9C1Q4G0N8 1177 aa21.02■□□□□ 0.96
APOBEC3F-203ENST00000476513 BRI3BPQ8WY22 251 aa21.02■□□□□ 0.96
APOBEC3F-203ENST00000476513 MYH16Q9H6N6 1097 aa21.02■□□□□ 0.96
APOBEC3F-203ENST00000476513 ECM29Q5VYK3 1845 aa21.01■□□□□ 0.95
APOBEC3F-203ENST00000476513 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.01■□□□□ 0.95
APOBEC3F-203ENST00000476513 NBPF11Q86T75 865 aa21.01■□□□□ 0.95
APOBEC3F-203ENST00000476513 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
APOBEC3F-203ENST00000476513 ZNF70Q9UC06 446 aaPredicted RBP21.01■□□□□ 0.95
APOBEC3F-203ENST00000476513 FLIIQ13045 1269 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 TNFAIP1Q13829 316 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 ARHGEF6Q15052 776 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 TAF1CQ15572 869 aaPredicted RBP21■□□□□ 0.95
APOBEC3F-203ENST00000476513 SLC4A8Q2Y0W8 1093 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 TWISTNBQ3B726 338 aaPredicted RBP21■□□□□ 0.95
APOBEC3F-203ENST00000476513 SPDYE2Q495Y8 402 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 CDAN1Q8IWY9 1227 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 LINS1Q8NG48 757 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 DNAAF4Q8WXU2 420 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 TEPSINQ96N21 525 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 ZFYVE28Q9HCC9 887 aa21■□□□□ 0.95
APOBEC3F-203ENST00000476513 CCL15-CCL14A0A0B4J2E2 113 aa20.99■□□□□ 0.95
APOBEC3F-203ENST00000476513 FOXO4P98177 505 aa20.99■□□□□ 0.95
APOBEC3F-203ENST00000476513 IFIT5Q13325 482 aaKnown RBP20.99■□□□□ 0.95
APOBEC3F-203ENST00000476513 CCL15Q16663 113 aa20.99■□□□□ 0.95
APOBEC3F-203ENST00000476513 CENPFP49454 3210 aa20.99■□□□□ 0.95
APOBEC3F-203ENST00000476513 BRCA2P51587 3418 aa20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 GTF2A2P52657 109 aa20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 VGLL4Q14135 290 aa20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 TDRD3Q9H7E2 651 aaKnown RBP20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 FAM205AQ6ZU69 1335 aa20.98■□□□□ 0.95
APOBEC3F-203ENST00000476513 H0YGN5 161 aa20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 MYCP01106 439 aaPredicted RBP20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 MAP3K9P80192 1104 aa20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 SERPINA10Q9UK55 444 aa20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 CHMP3Q9Y3E7 222 aa20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
APOBEC3F-203ENST00000476513 CEP290O15078 2479 aa20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 PLIN1O60240 522 aa20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 MFSD14BQ5SR56 506 aa20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 TMEM39BQ9GZU3 492 aa20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 TTF2Q9UNY4 1162 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms