RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 RAB11FIP4Q86YS3 637 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 LEO1Q8WVC0 666 aaPredicted RBP19.6■□□□□ 0.73
TVP23B-202ENST00000476139 MPHOSPH8Q99549 860 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 WWC3Q9ULE0 1092 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 PLCH1Q4KWH8 1693 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 FGFR2P21802 821 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 LPIN2Q92539 896 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 ZNF213O14771 459 aa19.59■□□□□ 0.73
TVP23B-202ENST00000476139 ZNF512BQ96KM6 892 aaPredicted RBP19.59■□□□□ 0.73
TVP23B-202ENST00000476139 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
TVP23B-202ENST00000476139 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
TVP23B-202ENST00000476139 APPP05067 770 aa19.59■□□□□ 0.73
TVP23B-202ENST00000476139 GUCY1B3Q02153 619 aa19.59■□□□□ 0.73
TVP23B-202ENST00000476139 SCAND2PQ9GZW5 306 aaPredicted RBP19.59■□□□□ 0.73
TVP23B-202ENST00000476139 ZKSCAN5Q9Y2L8 839 aa19.59■□□□□ 0.73
TVP23B-202ENST00000476139 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
TVP23B-202ENST00000476139 OFD1O75665 1012 aa19.58■□□□□ 0.73
TVP23B-202ENST00000476139 LETM1O95202 739 aaPredicted RBP19.58■□□□□ 0.73
TVP23B-202ENST00000476139 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.73
TVP23B-202ENST00000476139 FTOQ9C0B1 505 aaKnown RBP eCLIP19.58■□□□□ 0.73
TVP23B-202ENST00000476139 NBPF3Q9H094 633 aa19.58■□□□□ 0.73
TVP23B-202ENST00000476139 ELP1O95163 1332 aa19.58■□□□□ 0.73
TVP23B-202ENST00000476139 MROH5Q6ZUA9 1318 aa19.58■□□□□ 0.73
TVP23B-202ENST00000476139 AKAP11Q9UKA4 1901 aa19.58■□□□□ 0.72
TVP23B-202ENST00000476139 PRC1O43663 620 aa19.58■□□□□ 0.72
TVP23B-202ENST00000476139 ARID4AP29374 1257 aaPredicted RBP19.58■□□□□ 0.72
TVP23B-202ENST00000476139 ANTXR2P58335 489 aa19.58■□□□□ 0.72
TVP23B-202ENST00000476139 PGBD1Q96JS3 809 aa19.58■□□□□ 0.72
TVP23B-202ENST00000476139 FUCA2Q9BTY2 467 aa19.58■□□□□ 0.72
TVP23B-202ENST00000476139 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 TTF1Q15361 905 aaPredicted RBP19.57■□□□□ 0.72
TVP23B-202ENST00000476139 PTF1AQ7RTS3 328 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 MB21D2Q8IYB1 491 aaPredicted RBP19.57■□□□□ 0.72
TVP23B-202ENST00000476139 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 PDE6AP16499 860 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 RASGRF1Q13972 1273 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 DACT1Q9NYF0 836 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 MYH3P11055 1940 aa19.57■□□□□ 0.72
TVP23B-202ENST00000476139 GOLGA6L4A6NEF3 574 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
TVP23B-202ENST00000476139 HS1BP3Q53T59 392 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 INCENPQ9NQS7 918 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 SALL1Q9NSC2 1324 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 WTIPA6NIX2 430 aaPredicted RBP19.56■□□□□ 0.72
TVP23B-202ENST00000476139 NTSR2O95665 410 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 MCM5P33992 734 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 BCAMP50895 628 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 MYH14Q7Z406 1995 aaKnown RBP19.56■□□□□ 0.72
TVP23B-202ENST00000476139 TCRBV5S4A2TA0A5A2 114 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
TVP23B-202ENST00000476139 ZSCAN25Q6NSZ9 544 aa19.56■□□□□ 0.72
TVP23B-202ENST00000476139 UBE3CQ15386 1083 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 AK7Q96M32 723 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 UQCRFS1P1P0C7P4 283 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 EVCP57679 992 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 HMGN5P82970 282 aaKnown RBP19.55■□□□□ 0.72
TVP23B-202ENST00000476139 OTUD7BQ6GQQ9 843 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 TBC1D10CQ8IV04 446 aa19.55■□□□□ 0.72
TVP23B-202ENST00000476139 ZSCAN16Q9H4T2 348 aaPredicted RBP19.55■□□□□ 0.72
TVP23B-202ENST00000476139 KLF18A0A0U1RQI7 1052 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 SLC5A1P13866 664 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 RALYLQ86SE5 291 aaKnown RBP19.54■□□□□ 0.72
TVP23B-202ENST00000476139 CKAP2LQ8IYA6 745 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 HPS5Q9UPZ3 1129 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 NR1I2O75469 434 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 ADCY5O95622 1261 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 PARP10Q53GL7 1025 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 MAGEB6Q8N7X4 407 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 GJB4Q9NTQ9 266 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.54■□□□□ 0.72
TVP23B-202ENST00000476139 MYO5AQ9Y4I1 1855 aaKnown RBP19.54■□□□□ 0.72
TVP23B-202ENST00000476139 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
TVP23B-202ENST00000476139 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 IQSEC3Q9UPP2 1182 aaPredicted RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 LTBP4Q8N2S1 1624 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 AIDAQ96BJ3 306 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 C3orf67Q6ZVT6 689 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 C17orf53Q8N3J3 647 aaPredicted RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 LINC00116Q8NCU8 138 aa19.53■□□□□ 0.72
TVP23B-202ENST00000476139 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
TVP23B-202ENST00000476139 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.72
TVP23B-202ENST00000476139 IGHMBP2P38935 993 aaKnown RBP19.52■□□□□ 0.72
TVP23B-202ENST00000476139 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
TVP23B-202ENST00000476139 CYB5R4Q7L1T6 521 aa19.52■□□□□ 0.72
TVP23B-202ENST00000476139 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
TVP23B-202ENST00000476139 NUP62CLQ9H1M0 184 aa19.52■□□□□ 0.72
TVP23B-202ENST00000476139 CARMIL3Q8ND23 1372 aa19.52■□□□□ 0.72
TVP23B-202ENST00000476139 GOLGA8BA8MQT2 603 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms