RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 CNTNAP3BQ96NU0 1288 aa8.85□□□□□ -0.99
SLF1-204ENST00000475916 NECAB3Q96P71 396 aaPredicted RBP8.85□□□□□ -0.99
SLF1-204ENST00000475916 TRIM55Q9BYV6 548 aa8.85□□□□□ -0.99
SLF1-204ENST00000475916 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
SLF1-204ENST00000475916 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
SLF1-204ENST00000475916 THBS1P07996 1170 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 CELA3AP09093 270 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 ACPPP15309 386 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 NKD1Q969G9 470 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
SLF1-204ENST00000475916 TLDC2A0PJX2 215 aa8.83□□□□□ -1
SLF1-204ENST00000475916 J3QW42 95 aa8.83□□□□□ -1
SLF1-204ENST00000475916 TRPA1O75762 1119 aa8.83□□□□□ -1
SLF1-204ENST00000475916 GRIN2CQ14957 1233 aa8.83□□□□□ -1
SLF1-204ENST00000475916 LRRC14Q15048 493 aa8.83□□□□□ -1
SLF1-204ENST00000475916 CEP135Q66GS9 1140 aa8.83□□□□□ -1
SLF1-204ENST00000475916 FBXL19Q6PCT2 694 aa8.83□□□□□ -1
SLF1-204ENST00000475916 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
SLF1-204ENST00000475916 HFE2Q6ZVN8 426 aa8.83□□□□□ -1
SLF1-204ENST00000475916 EAF1Q96JC9 268 aaPredicted RBP8.83□□□□□ -1
SLF1-204ENST00000475916 RHOVQ96L33 236 aa8.83□□□□□ -1
SLF1-204ENST00000475916 MIR1-1HGQ9H1L0 117 aa8.83□□□□□ -1
SLF1-204ENST00000475916 CLEC4MQ9H2X3 399 aaPredicted RBP8.83□□□□□ -1
SLF1-204ENST00000475916 ZNF576Q9H609 170 aa8.83□□□□□ -1
SLF1-204ENST00000475916 AAASQ9NRG9 546 aa8.83□□□□□ -1
SLF1-204ENST00000475916 DNAJB12Q9NXW2 375 aaKnown RBP8.83□□□□□ -1
SLF1-204ENST00000475916 TLR6Q9Y2C9 796 aa8.83□□□□□ -1
SLF1-204ENST00000475916 CDC14CA4D256 554 aa8.82□□□□□ -1
SLF1-204ENST00000475916 METTL12A8MUP2 240 aa8.82□□□□□ -1
SLF1-204ENST00000475916 BMP4P12644 408 aa8.82□□□□□ -1
SLF1-204ENST00000475916 PTPRAP18433 802 aa8.82□□□□□ -1
SLF1-204ENST00000475916 MAP3K10Q02779 954 aa8.82□□□□□ -1
SLF1-204ENST00000475916 PCNX4Q63HM2 1172 aa8.82□□□□□ -1
SLF1-204ENST00000475916 SYT9Q86SS6 491 aa8.82□□□□□ -1
SLF1-204ENST00000475916 CCDC84Q86UT8 332 aaPredicted RBP8.82□□□□□ -1
SLF1-204ENST00000475916 CRBNQ96SW2 442 aa8.82□□□□□ -1
SLF1-204ENST00000475916 EMILIN2Q9BXX0 1053 aa8.82□□□□□ -1
SLF1-204ENST00000475916 KCNQ5Q9NR82 932 aa8.82□□□□□ -1
SLF1-204ENST00000475916 GINM1Q9NU53 330 aa8.82□□□□□ -1
SLF1-204ENST00000475916 ENC1O14682 589 aa8.81□□□□□ -1
SLF1-204ENST00000475916 ST8SIA5O15466 376 aa8.81□□□□□ -1
SLF1-204ENST00000475916 EIF4EBP3O60516 100 aaPredicted RBP8.81□□□□□ -1
SLF1-204ENST00000475916 GREM1O60565 184 aa8.81□□□□□ -1
SLF1-204ENST00000475916 BPNT1O95861 308 aa8.81□□□□□ -1
SLF1-204ENST00000475916 CDK11BP21127 795 aaKnown RBP8.81□□□□□ -1
SLF1-204ENST00000475916 SOX9P48436 509 aa8.81□□□□□ -1
SLF1-204ENST00000475916 CABP4P57796 275 aa8.81□□□□□ -1
SLF1-204ENST00000475916 BMS1Q14692 1282 aaKnown RBP8.81□□□□□ -1
SLF1-204ENST00000475916 ELMSAN1Q6PJG2 1045 aa8.81□□□□□ -1
SLF1-204ENST00000475916 FAM35AQ86V20 835 aa8.81□□□□□ -1
SLF1-204ENST00000475916 CYP8B1Q9UNU6 501 aa8.81□□□□□ -1
SLF1-204ENST00000475916 NSFL1CQ9UNZ2 370 aaKnown RBP8.81□□□□□ -1
SLF1-204ENST00000475916 CDK11AQ9UQ88 783 aaPredicted RBP8.81□□□□□ -1
SLF1-204ENST00000475916 NFKBIEO00221 500 aa8.8□□□□□ -1
SLF1-204ENST00000475916 SIN3BO75182 1162 aa8.8□□□□□ -1
SLF1-204ENST00000475916 MCM4P33991 863 aa8.8□□□□□ -1
SLF1-204ENST00000475916 ATP11AP98196 1134 aa8.8□□□□□ -1
SLF1-204ENST00000475916 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
SLF1-204ENST00000475916 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
SLF1-204ENST00000475916 SV2AQ7L0J3 742 aa8.8□□□□□ -1
SLF1-204ENST00000475916 TRIM42Q8IWZ5 723 aa8.8□□□□□ -1
SLF1-204ENST00000475916 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
SLF1-204ENST00000475916 ZNF408Q9H9D4 720 aa8.8□□□□□ -1
SLF1-204ENST00000475916 UBP1Q9NZI7 540 aa8.8□□□□□ -1
SLF1-204ENST00000475916 SIRPGQ9P1W8 387 aa8.8□□□□□ -1
SLF1-204ENST00000475916 MRVI1Q9Y6F6 885 aa8.8□□□□□ -1
SLF1-204ENST00000475916 ANKRD62A6NC57 917 aa8.79□□□□□ -1
SLF1-204ENST00000475916 K7ELQ4 463 aaPredicted RBP8.79□□□□□ -1
SLF1-204ENST00000475916 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
SLF1-204ENST00000475916 NME2P22392 152 aa8.79□□□□□ -1
SLF1-204ENST00000475916 HNRNPUQ00839 825 aaKnown RBP eCLIP8.79□□□□□ -1
SLF1-204ENST00000475916 CTBSQ01459 385 aa8.79□□□□□ -1
SLF1-204ENST00000475916 TNNI3KQ59H18 835 aa8.79□□□□□ -1
SLF1-204ENST00000475916 ZNF468Q5VIY5 522 aaPredicted RBP8.79□□□□□ -1
SLF1-204ENST00000475916 ANKS3Q6ZW76 656 aa8.79□□□□□ -1
SLF1-204ENST00000475916 CACTIN-AS1Q8N1I8 211 aa8.79□□□□□ -1
SLF1-204ENST00000475916 JARID2Q92833 1246 aaPredicted RBP8.79□□□□□ -1
SLF1-204ENST00000475916 PLD4Q96BZ4 506 aa8.79□□□□□ -1
SLF1-204ENST00000475916 HHIPQ96QV1 700 aa8.79□□□□□ -1
SLF1-204ENST00000475916 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
SLF1-204ENST00000475916 SRRTQ9BXP5 876 aaKnown RBP8.79□□□□□ -1
SLF1-204ENST00000475916 CBX8Q9HC52 389 aa8.79□□□□□ -1
SLF1-204ENST00000475916 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
SLF1-204ENST00000475916 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
SLF1-204ENST00000475916 CPB1P15086 417 aa8.78□□□□□ -1
SLF1-204ENST00000475916 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
SLF1-204ENST00000475916 ZNF165P49910 485 aa8.78□□□□□ -1
SLF1-204ENST00000475916 ZNF157P51786 506 aaPredicted RBP8.78□□□□□ -1
SLF1-204ENST00000475916 PCDH1Q08174 1060 aa8.78□□□□□ -1
SLF1-204ENST00000475916 SEZ6Q53EL9 994 aa8.78□□□□□ -1
SLF1-204ENST00000475916 FBXW10Q5XX13 1052 aa8.78□□□□□ -1
SLF1-204ENST00000475916 MKL1Q969V6 931 aa8.78□□□□□ -1
SLF1-204ENST00000475916 TRIM47Q96LD4 638 aa8.78□□□□□ -1
SLF1-204ENST00000475916 FERD3LQ96RJ6 166 aa8.78□□□□□ -1
SLF1-204ENST00000475916 MUC3BQ9H195 1237 aa8.78□□□□□ -1
SLF1-204ENST00000475916 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
SLF1-204ENST00000475916 SLITRK4Q8IW52 837 aa8.77□□□□□ -1.01
SLF1-204ENST00000475916 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
SLF1-204ENST00000475916 IMPDH2P12268 514 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms