RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 USP26Q9BXU7 913 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 SNRKQ9NRH2 765 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 GGA1Q9UJY5 639 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 DENND2AQ9ULE3 1009 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
MRPL55-227ENST00000475832 C21orf2O43822 256 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 HIBADHP31937 336 aaKnown RBP14.72□□□□□ -0.05
MRPL55-227ENST00000475832 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-227ENST00000475832 BECN1Q14457 450 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 WASHC4Q2M389 1173 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 ZNF804AQ7Z570 1209 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 NSFL1CQ9UNZ2 370 aaKnown RBP14.72□□□□□ -0.05
MRPL55-227ENST00000475832 ATP6V0A2Q9Y487 856 aa14.72□□□□□ -0.05
MRPL55-227ENST00000475832 SPEF2Q9C093 1822 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 NFKBIEO00221 500 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 MCAMP43121 646 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 BCAMP50895 628 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 MAP3K12Q12852 859 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 MCMDC2Q4G0Z9 681 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 EDC3Q96F86 508 aaKnown RBP14.71□□□□□ -0.05
MRPL55-227ENST00000475832 PRDM10Q9NQV6 1147 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 RNF181Q9P0P0 153 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 NDUFB9Q9Y6M9 179 aa14.71□□□□□ -0.05
MRPL55-227ENST00000475832 LTBP3Q9NS15 1303 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 SNED1Q8TER0 1413 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 SNAP23O00161 211 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 UFL1O94874 794 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 GYG1P46976 350 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 GPSM2P81274 684 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 IL27Q8NEV9 243 aa14.7□□□□□ -0.06
MRPL55-227ENST00000475832 IPO9Q96P70 1041 aaKnown RBP14.7□□□□□ -0.06
MRPL55-227ENST00000475832 SBF1O95248 1867 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 PDS5AQ29RF7 1337 aaKnown RBP14.69□□□□□ -0.06
MRPL55-227ENST00000475832 FOXN1O15353 648 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 IGSF3O75054 1194 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 MLLT1Q03111 559 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-227ENST00000475832 RASGRF1Q13972 1273 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 SCARF1Q14162 830 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 C15orf52Q6ZUT6 534 aaKnown RBP14.69□□□□□ -0.06
MRPL55-227ENST00000475832 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 MPNDQ8N594 471 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-227ENST00000475832 FAM227BQ96M60 508 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 EYA3Q99504 573 aa14.69□□□□□ -0.06
MRPL55-227ENST00000475832 C6orf229H3BNL8 230 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 ZBTB22O15209 634 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 IDH1O75874 414 aaKnown RBP14.68□□□□□ -0.06
MRPL55-227ENST00000475832 CYP2E1P05181 493 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-227ENST00000475832 LMNB1P20700 586 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 ANAPC15P60006 121 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 RASSF7Q02833 373 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 RNF20Q5VTR2 975 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 CC2D2BQ6DHV5 1058 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 TMED8Q6PL24 325 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-227ENST00000475832 DPP8Q6V1X1 898 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-227ENST00000475832 ZGPATQ8N5A5 531 aaKnown RBP14.68□□□□□ -0.06
MRPL55-227ENST00000475832 AIDAQ96BJ3 306 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 ANTXR1Q9H6X2 564 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
MRPL55-227ENST00000475832 ZC3H4Q9UPT8 1303 aaKnown RBP14.67□□□□□ -0.06
MRPL55-227ENST00000475832 CACNA1SQ13698 1873 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 A0A0D9SFI3 127 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 G3V3G9 751 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-227ENST00000475832 RABEP1Q15276 862 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 UBE3CQ15386 1083 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 ZMYM1Q5SVZ6 1142 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 SPTY2D1Q68D10 685 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-227ENST00000475832 TBC1D16Q8TBP0 767 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 APPBP2Q92624 585 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
MRPL55-227ENST00000475832 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
MRPL55-227ENST00000475832 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 COL4A1P02462 1669 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 MED23Q9ULK4 1368 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 VEGFAP15692 232 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 CTCFP49711 727 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 PI16Q6UXB8 463 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 RTKN2Q8IZC4 609 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 ABHD8Q96I13 439 aa14.66□□□□□ -0.06
MRPL55-227ENST00000475832 ZC3H12CQ9C0D7 883 aaKnown RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 LSG1Q9H089 658 aaKnown RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-227ENST00000475832 ADD2P35612 726 aa14.65□□□□□ -0.06
MRPL55-227ENST00000475832 SUPT20HQ8NEM7 779 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms