RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-223ENST00000475732 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
DMD-223ENST00000475732 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 IL1R1P14778 569 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 BCAMP50895 628 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 CXCL9Q07325 125 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 FBXO33Q7Z6M2 555 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 GPC2Q8N158 579 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
DMD-223ENST00000475732 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
DMD-223ENST00000475732 RAD17O75943 681 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 GORABQ5T7V8 394 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 XAGE2Q96GT9 111 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 GNL3LQ9NVN8 582 aaKnown RBP12.32□□□□□ -0.44
DMD-223ENST00000475732 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
DMD-223ENST00000475732 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 PSMD14O00487 310 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
DMD-223ENST00000475732 DDNO94850 711 aaPredicted RBP12.31□□□□□ -0.44
DMD-223ENST00000475732 ADORA1P30542 326 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
DMD-223ENST00000475732 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
DMD-223ENST00000475732 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
DMD-223ENST00000475732 ZNF646O15015 1829 aaPredicted RBP12.31□□□□□ -0.44
DMD-223ENST00000475732 IGHDP01880 384 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
DMD-223ENST00000475732 GTF2IP78347 998 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 CCDC158Q5M9N0 1113 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 CCDC102BQ68D86 513 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 AACSQ86V21 672 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
DMD-223ENST00000475732 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
DMD-223ENST00000475732 IQSEC3Q9UPP2 1182 aaPredicted RBP12.3□□□□□ -0.44
DMD-223ENST00000475732 WDR90Q96KV7 1748 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 SCN4AP35499 1836 aa12.3□□□□□ -0.44
DMD-223ENST00000475732 SEMA3EO15041 775 aa12.29□□□□□ -0.44
DMD-223ENST00000475732 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 PHKA1P46020 1223 aa12.29□□□□□ -0.44
DMD-223ENST00000475732 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
DMD-223ENST00000475732 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
DMD-223ENST00000475732 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 DBNLQ9UJU6 430 aaKnown RBP12.29□□□□□ -0.44
DMD-223ENST00000475732 FAM205AQ6ZU69 1335 aa12.29□□□□□ -0.44
DMD-223ENST00000475732 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
DMD-223ENST00000475732 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
DMD-223ENST00000475732 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
DMD-223ENST00000475732 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
DMD-223ENST00000475732 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
DMD-223ENST00000475732 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
DMD-223ENST00000475732 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
DMD-223ENST00000475732 DENND2AQ9ULE3 1009 aa12.28□□□□□ -0.44
DMD-223ENST00000475732 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
DMD-223ENST00000475732 IQCA1LA6NCM1 817 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.45
DMD-223ENST00000475732 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
DMD-223ENST00000475732 GMPSP49915 693 aaPredicted RBP12.27□□□□□ -0.45
DMD-223ENST00000475732 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
DMD-223ENST00000475732 CHAF1AQ13111 956 aaPredicted RBP12.27□□□□□ -0.45
DMD-223ENST00000475732 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 TBC1D22AQ8WUA7 517 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 DPF2Q92785 391 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 RRAGCQ9HB90 399 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 JAG2Q9Y219 1238 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
DMD-223ENST00000475732 VEGFAP15692 232 aaPredicted RBP12.26□□□□□ -0.45
DMD-223ENST00000475732 SCNN1DP51172 638 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 RASGRF1Q13972 1273 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 MFSD14BQ5SR56 506 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 ZNF784Q8NCA9 323 aaPredicted RBP12.26□□□□□ -0.45
DMD-223ENST00000475732 WDR66Q8TBY9 1149 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
DMD-223ENST00000475732 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 HACL1Q9UJ83 578 aa12.26□□□□□ -0.45
DMD-223ENST00000475732 POTECB2RU33 542 aa12.25□□□□□ -0.45
DMD-223ENST00000475732 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
DMD-223ENST00000475732 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
DMD-223ENST00000475732 GMLQ99445 158 aa12.25□□□□□ -0.45
DMD-223ENST00000475732 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
DMD-223ENST00000475732 CNOT7Q9UIV1 285 aaKnown RBP12.25□□□□□ -0.45
DMD-223ENST00000475732 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
DMD-223ENST00000475732 COL1A1P02452 1464 aaPredicted RBP12.25□□□□□ -0.45
DMD-223ENST00000475732 H7C1D1 291 aa12.24□□□□□ -0.45
DMD-223ENST00000475732 USP17L8P0C7I0 530 aa12.24□□□□□ -0.45
DMD-223ENST00000475732 EPS15P42566 896 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms