RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 BMP8BP34820 402 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 VCANP13611 3396 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 COL9A1P20849 921 aa13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 CCL15Q16663 113 aa13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-212ENST00000475684 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 TLR2O60603 784 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 GRK4P32298 578 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 BCAMP50895 628 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 GTF2A2P52657 109 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 DLGAP5Q15398 846 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 GDF15Q99988 308 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
CCHCR1-212ENST00000475684 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
CCHCR1-212ENST00000475684 SRRDQ9UH36 339 aa13.13□□□□□ -0.31
CCHCR1-212ENST00000475684 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
CCHCR1-212ENST00000475684 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
CCHCR1-212ENST00000475684 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
CCHCR1-212ENST00000475684 SGPL1O95470 568 aa13.12□□□□□ -0.31
CCHCR1-212ENST00000475684 HOXD10P28358 340 aa13.12□□□□□ -0.31
CCHCR1-212ENST00000475684 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CCHCR1-212ENST00000475684 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
CCHCR1-212ENST00000475684 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
CCHCR1-212ENST00000475684 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 TFRCP02786 760 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 NEFMP07197 916 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 PSMC4P43686 418 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
CCHCR1-212ENST00000475684 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 MYO1BO43795 1136 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 OSBPP22059 807 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 TDHQ8IZJ6 230 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
CCHCR1-212ENST00000475684 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 CTGFP29279 349 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 GTF2IP78347 998 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
CCHCR1-212ENST00000475684 RASA3Q14644 834 aa13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 ZCCHC17Q9NP64 241 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.32
CCHCR1-212ENST00000475684 BTBD19C9JJ37 291 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 CETPP11597 493 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 CCT4P50991 539 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 VGLL4Q14135 290 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
CCHCR1-212ENST00000475684 SYN1P17600 705 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 CAPN2P17655 700 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 SLAIN1Q8ND83 568 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 FAM161BQ96MY7 647 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 DEFB118Q96PH6 123 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 CSADQ9Y600 493 aa13.06□□□□□ -0.32
CCHCR1-212ENST00000475684 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 PDE8AO60658 829 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 PLA2G5P39877 138 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 PRKCZQ05513 592 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms