RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 GTF2IP78347 998 aa27.16■■□□□ 1.94
MCF2L2-209ENST00000475664 RASGRF1Q13972 1273 aa27.16■■□□□ 1.94
MCF2L2-209ENST00000475664 STRIP1Q5VSL9 837 aa27.16■■□□□ 1.94
MCF2L2-209ENST00000475664 OTUD7AQ8TE49 926 aaPredicted RBP27.16■■□□□ 1.94
MCF2L2-209ENST00000475664 SALL3Q9BXA9 1300 aa27.16■■□□□ 1.94
MCF2L2-209ENST00000475664 FRAT2O75474 233 aaPredicted RBP27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 SCARF1Q14162 830 aa27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 TNIP1Q15025 636 aa27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 DACT2Q5SW24 774 aa27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 TTLL5Q6EMB2 1281 aa27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 DENND2AQ9ULE3 1009 aa27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 PDS5AQ29RF7 1337 aaKnown RBP27.15■■□□□ 1.94
MCF2L2-209ENST00000475664 VIL1P09327 827 aaKnown RBP27.14■■□□□ 1.94
MCF2L2-209ENST00000475664 GPC2Q8N158 579 aa27.14■■□□□ 1.94
MCF2L2-209ENST00000475664 JAG2Q9Y219 1238 aa27.14■■□□□ 1.94
MCF2L2-209ENST00000475664 MCAMP43121 646 aa27.13■■□□□ 1.93
MCF2L2-209ENST00000475664 CHAF1AQ13111 956 aaPredicted RBP27.13■■□□□ 1.93
MCF2L2-209ENST00000475664 FBXW7Q969H0 707 aa27.13■■□□□ 1.93
MCF2L2-209ENST00000475664 HMG20BQ9P0W2 317 aa27.13■■□□□ 1.93
MCF2L2-209ENST00000475664 GLTPD2A6NH11 291 aa27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 DDNO94850 711 aaPredicted RBP27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 DPY19L2Q6NUT2 758 aa27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 RSBN1LQ6PCB5 846 aaPredicted RBP27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 ECHDC1Q9NTX5 307 aa27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 GJA3Q9Y6H8 435 aa27.12■■□□□ 1.93
MCF2L2-209ENST00000475664 FKBP1AP62942 108 aaKnown RBP27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 PI16Q6UXB8 463 aa27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 SPATA5Q8NB90 893 aa27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 GPATCH3Q96I76 525 aa27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
MCF2L2-209ENST00000475664 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
MCF2L2-209ENST00000475664 ATP5JP18859 108 aa27.1■■□□□ 1.93
MCF2L2-209ENST00000475664 MX1P20591 662 aa27.1■■□□□ 1.93
MCF2L2-209ENST00000475664 CERS5Q8N5B7 392 aa27.1■■□□□ 1.93
MCF2L2-209ENST00000475664 TTC41PQ6P2S7 1318 aa27.1■■□□□ 1.93
MCF2L2-209ENST00000475664 WDR66Q8TBY9 1149 aa27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 TBC1D22AQ8WUA7 517 aa27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 GMLQ99445 158 aa27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 ZBTB12Q9Y330 459 aaPredicted RBP27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 MYO3BQ8WXR4 1341 aa27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 SALL1Q9NSC2 1324 aa27.09■■□□□ 1.93
MCF2L2-209ENST00000475664 PDE4AP27815 886 aa27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 GMPSP49915 693 aaPredicted RBP27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 MFSD14BQ5SR56 506 aa27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 TSHZ3Q63HK5 1081 aa27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 SNRKQ9NRH2 765 aa27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 STAP2Q9UGK3 403 aa27.08■■□□□ 1.93
MCF2L2-209ENST00000475664 RPS12P25398 132 aaKnown RBP27.07■■□□□ 1.92
MCF2L2-209ENST00000475664 AGBL3Q8NEM8 1001 aa27.07■■□□□ 1.92
MCF2L2-209ENST00000475664 L3MBTL3Q96JM7 780 aaPredicted RBP27.07■■□□□ 1.92
MCF2L2-209ENST00000475664 MYO5AQ9Y4I1 1855 aaKnown RBP27.06■■□□□ 1.92
MCF2L2-209ENST00000475664 SCNN1DP51172 638 aa27.06■■□□□ 1.92
MCF2L2-209ENST00000475664 PDE1AP54750 535 aa27.06■■□□□ 1.92
MCF2L2-209ENST00000475664 PI4K2BQ8TCG2 481 aa27.06■■□□□ 1.92
MCF2L2-209ENST00000475664 SCN4AP35499 1836 aa27.06■■□□□ 1.92
MCF2L2-209ENST00000475664 DOCK2Q92608 1830 aa27.05■■□□□ 1.92
MCF2L2-209ENST00000475664 ZAP70P43403 619 aa27.05■■□□□ 1.92
MCF2L2-209ENST00000475664 PLEKHM2Q8IWE5 1019 aa27.05■■□□□ 1.92
MCF2L2-209ENST00000475664 DPF2Q92785 391 aa27.05■■□□□ 1.92
MCF2L2-209ENST00000475664 BOLA2Q9H3K6 86 aa27.05■■□□□ 1.92
MCF2L2-209ENST00000475664 CYP2E1P05181 493 aaPredicted RBP27.04■■□□□ 1.92
MCF2L2-209ENST00000475664 GRIK5Q16478 980 aa27.04■■□□□ 1.92
MCF2L2-209ENST00000475664 HAUS7Q99871 368 aa27.04■■□□□ 1.92
MCF2L2-209ENST00000475664 NDUFB9Q9Y6M9 179 aa27.04■■□□□ 1.92
MCF2L2-209ENST00000475664 ERC2O15083 957 aa27.03■■□□□ 1.92
MCF2L2-209ENST00000475664 AOX1Q06278 1338 aa27.03■■□□□ 1.92
MCF2L2-209ENST00000475664 ZGPATQ8N5A5 531 aaKnown RBP27.03■■□□□ 1.92
MCF2L2-209ENST00000475664 GPRC5DQ9NZD1 345 aa27.03■■□□□ 1.92
MCF2L2-209ENST00000475664 SUGT1Q9Y2Z0 365 aa27.03■■□□□ 1.92
MCF2L2-209ENST00000475664 MAST2Q6P0Q8 1798 aa27.02■■□□□ 1.92
MCF2L2-209ENST00000475664 GLRX3O76003 335 aaKnown RBP27.02■■□□□ 1.92
MCF2L2-209ENST00000475664 TBC1D9Q6ZT07 1266 aa27.02■■□□□ 1.92
MCF2L2-209ENST00000475664 KIAA0825Q8IV33 1275 aa27.02■■□□□ 1.92
MCF2L2-209ENST00000475664 OSBPL3Q9H4L5 887 aa27.02■■□□□ 1.92
MCF2L2-209ENST00000475664 YY1P25490 414 aa27.01■■□□□ 1.91
MCF2L2-209ENST00000475664 PRDX5P30044 214 aa27.01■■□□□ 1.91
MCF2L2-209ENST00000475664 DNAJC2Q99543 621 aaKnown RBP27.01■■□□□ 1.91
MCF2L2-209ENST00000475664 SHTN1A0MZ66 631 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 POTECB2RU33 542 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 USP17L8P0C7I0 530 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 MICALL2Q8IY33 904 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 ANTXR1Q9H6X2 564 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 PIH1D3Q9NQM4 214 aaKnown RBP27■■□□□ 1.91
MCF2L2-209ENST00000475664 ABCF2Q9UG63 623 aa27■■□□□ 1.91
MCF2L2-209ENST00000475664 CNOT7Q9UIV1 285 aaKnown RBP27■■□□□ 1.91
MCF2L2-209ENST00000475664 ADAMTSL1Q8N6G6 1762 aa26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 F8W031 263 aaPredicted RBP26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 LDHBP07195 334 aaKnown RBP26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 ZNF280AP59817 542 aaPredicted RBP26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 ZNF526Q8TF50 670 aaPredicted RBP26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 EDC3Q96F86 508 aaKnown RBP26.99■■□□□ 1.91
MCF2L2-209ENST00000475664 GOLIM4O00461 696 aa26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 LMOD1P29536 600 aaPredicted RBP26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 SPTY2D1Q68D10 685 aaPredicted RBP26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 PAG1Q9NWQ8 432 aa26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 HACL1Q9UJ83 578 aa26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 TTF2Q9UNY4 1162 aaKnown RBP26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 GTF3C3Q9Y5Q9 886 aa26.98■■□□□ 1.91
MCF2L2-209ENST00000475664 MYH7P12883 1935 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms