RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
NIPAL3-206ENST00000475663 ZNF609O15014 1411 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 GRM1Q13255 1194 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 GRIK5Q16478 980 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 OGFOD1Q8N543 542 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
NIPAL3-206ENST00000475663 WNT10BO00744 389 aa16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 PAXIP1Q6ZW49 1069 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 AOX1Q06278 1338 aa16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
NIPAL3-206ENST00000475663 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 CIAO1O76071 339 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 SLC5A1P13866 664 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 ADORA1P30542 326 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 VEGFBP49765 207 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 TFCP2Q12800 502 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 MTX1Q13505 466 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 SULF1Q8IWU6 871 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 HDAC9Q9UKV0 1011 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 PSME4Q14997 1843 aa16.37■□□□□ 0.21
NIPAL3-206ENST00000475663 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-206ENST00000475663 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
NIPAL3-206ENST00000475663 LPIN2Q92539 896 aa16.36■□□□□ 0.21
NIPAL3-206ENST00000475663 FAM205AQ6ZU69 1335 aa16.36■□□□□ 0.21
NIPAL3-206ENST00000475663 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 TIMM10P62072 90 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 CFAP100Q494V2 611 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 COG6Q9Y2V7 657 aa16.35■□□□□ 0.21
NIPAL3-206ENST00000475663 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 PHKA1P46020 1223 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 CDCA5Q96FF9 252 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 ZBED3Q96IU2 234 aaPredicted RBP16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 FBXO3Q9UK99 471 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 TTF2Q9UNY4 1162 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
NIPAL3-206ENST00000475663 FKBP1AP62942 108 aaKnown RBP16.33■□□□□ 0.2
NIPAL3-206ENST00000475663 ATP8B2P98198 1209 aa16.33■□□□□ 0.2
NIPAL3-206ENST00000475663 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-206ENST00000475663 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 POLA2Q14181 598 aa16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 MOB2Q70IA6 237 aa16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 NEUROD6Q96NK8 337 aa16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-206ENST00000475663 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-206ENST00000475663 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
NIPAL3-206ENST00000475663 AOC2O75106 756 aa16.31■□□□□ 0.2
NIPAL3-206ENST00000475663 HUNKP57058 714 aa16.31■□□□□ 0.2
NIPAL3-206ENST00000475663 PITPNM2Q9BZ72 1349 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 SURF6O75683 361 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 HSPA1AP0DMV8 641 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 HSPA1BP0DMV9 641 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 OS9Q13438 667 aaPredicted RBP16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 PRKG1Q13976 671 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 XAGE2Q96GT9 111 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
NIPAL3-206ENST00000475663 CRKP46108 304 aa16.29■□□□□ 0.2
NIPAL3-206ENST00000475663 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
NIPAL3-206ENST00000475663 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-206ENST00000475663 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
NIPAL3-206ENST00000475663 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-206ENST00000475663 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
NIPAL3-206ENST00000475663 ZIC5Q96T25 663 aa16.28■□□□□ 0.2
NIPAL3-206ENST00000475663 UBE2Q2LH0YL09 131 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 MS4A1P11836 297 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 PRDX5P30044 214 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 CACNB3P54284 484 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 BCL11AQ9H165 835 aa16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 GNL3LQ9NVN8 582 aaKnown RBP16.27■□□□□ 0.2
NIPAL3-206ENST00000475663 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms