RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 FANCGO15287 622 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.319e-12■■■■■ 76.3
U2AF1-209ENST00000475639 KIF1BO60333 1816 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 H3BQF6 201 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 EIF3CLB5ME19 914 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CTAGE5O15320 804 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 GSDMDP57764 484 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CKAP4Q07065 602 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CAVIN2O95810 425 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 MXRA7P84157 204 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 KIAA0753Q2KHM9 967 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 NUP88Q99567 741 aaPredicted RBP13.08□□□□□ -0.32
U2AF1-209ENST00000475639 LRP2BPQ9P2M1 347 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
U2AF1-209ENST00000475639 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 CCDC77Q9BR77 488 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 SIL1Q9H173 461 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 EFCAB8A8MWE9 144 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 DNAI1Q9UI46 699 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 FAM83GA6ND36 823 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 NOL3O60936 208 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 A0A087WWV3 80 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 ETF1P62495 437 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
U2AF1-209ENST00000475639 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
U2AF1-209ENST00000475639 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.06□□□□□ -0.32
U2AF1-209ENST00000475639 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
U2AF1-209ENST00000475639 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 NDC80O14777 642 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 IVLP07476 585 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
U2AF1-209ENST00000475639 EVCP57679 992 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 SGSM2O43147 1006 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 ZBTB16Q05516 673 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 ME3Q16798 604 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
U2AF1-209ENST00000475639 CPLX3Q8WVH0 158 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 LRRC45Q96CN5 670 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 ANKRD65E5RJM6 399 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 FBLN1P23142 703 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 ARL1P40616 181 aaPredicted RBP13.06□□□□□ -0.32
U2AF1-209ENST00000475639 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 STIM2Q9P246 746 aa13.06□□□□□ -0.32
U2AF1-209ENST00000475639 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 GSCP56915 257 aaPredicted RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 AACSQ86V21 672 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 CCDC110Q8TBZ0 833 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 SUGP1Q8IWZ8 645 aaKnown RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 KIF3CO14782 793 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 EHBP1Q8NDI1 1231 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
U2AF1-209ENST00000475639 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
U2AF1-209ENST00000475639 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ATP2C2O75185 946 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ADCK5Q3MIX3 580 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ATRIPQ8WXE1 791 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ARFGAP3Q9NP61 516 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 AKR1B10O60218 316 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms