RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
SHQ1-207ENST00000475558 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
SHQ1-207ENST00000475558 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
SHQ1-207ENST00000475558 GPRC5DQ9NZD1 345 aa8.64□□□□□ -1.03
SHQ1-207ENST00000475558 TRMT112Q9UI30 125 aaKnown RBP8.64□□□□□ -1.03
SHQ1-207ENST00000475558 THSD7BQ9C0I4 1608 aa8.64□□□□□ -1.03
SHQ1-207ENST00000475558 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
SHQ1-207ENST00000475558 PPIP5K2O43314 1243 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 PDE8AO60658 829 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 AOC2O75106 756 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
SHQ1-207ENST00000475558 CELF2O95319 508 aaKnown RBP8.63□□□□□ -1.03
SHQ1-207ENST00000475558 CSF1RP07333 972 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 CCDC57Q2TAC2 916 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 TICAM2Q86XR7 235 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
SHQ1-207ENST00000475558 SUPT20HQ8NEM7 779 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 NUP98P52948 1817 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 LTBP1Q14766 1721 aa8.63□□□□□ -1.03
SHQ1-207ENST00000475558 CASP8AP2Q9UKL3 1982 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 COL4A5P29400 1685 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 SH3TC1Q8TE82 1336 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 GPTP24298 496 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 CASP7P55210 303 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
SHQ1-207ENST00000475558 AOC3Q16853 763 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
SHQ1-207ENST00000475558 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
SHQ1-207ENST00000475558 SUCLG2Q96I99 432 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 NLRP3Q96P20 1036 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 MCOLN1Q9GZU1 580 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 PGAP2Q9UHJ9 254 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 ATP6V0A2Q9Y487 856 aa8.62□□□□□ -1.03
SHQ1-207ENST00000475558 IRS4O14654 1257 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 BBOX1O75936 387 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 CIAO1O76071 339 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 CXCL9Q07325 125 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 NOGQ13253 232 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 TNIP1Q15025 636 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 DOK7Q18PE1 504 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 CDC37L1Q7L3B6 337 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 GLIS2Q9BZE0 524 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
SHQ1-207ENST00000475558 GPR108Q9NPR9 543 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 AKAP2Q9Y2D5 859 aa8.61□□□□□ -1.03
SHQ1-207ENST00000475558 PDE4DIPQ5VU43 2346 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 UBN2Q6ZU65 1347 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 ANKRD18BA2A2Z9 1011 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 ERC2O15083 957 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 NTSR2O95665 410 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
SHQ1-207ENST00000475558 FOXO4P98177 505 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 DGKZQ13574 1117 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 CCDC152Q4G0S7 254 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 SP8Q8IXZ3 490 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
SHQ1-207ENST00000475558 LAMB4A4D0S4 1761 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 PNMA6EA0A0J9YXQ4 647 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 H7C1D1 291 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 HOXB3P14651 431 aaPredicted RBP8.59□□□□□ -1.03
SHQ1-207ENST00000475558 KIAA2012Q0VF49 1180 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 SF3B3Q15393 1217 aaKnown RBP8.59□□□□□ -1.03
SHQ1-207ENST00000475558 TAF7LQ5H9L4 462 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 CASC1Q6TDU7 716 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 DPP8Q6V1X1 898 aaPredicted RBP8.59□□□□□ -1.03
SHQ1-207ENST00000475558 MPNDQ8N594 471 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 TTLL11Q8NHH1 800 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 RHPN1Q8TCX5 695 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 FAM89AQ96GI7 184 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 KAZALD1Q96I82 304 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 CDC5LQ99459 802 aaKnown RBP8.59□□□□□ -1.03
SHQ1-207ENST00000475558 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
SHQ1-207ENST00000475558 AOX1Q06278 1338 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 RAD17O75943 681 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
SHQ1-207ENST00000475558 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
SHQ1-207ENST00000475558 HIRAP54198 1017 aaPredicted RBP8.58□□□□□ -1.04
SHQ1-207ENST00000475558 CTSWP56202 376 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 HUNKP57058 714 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 BMP2KLQ5H9B9 411 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 STAP2Q9UGK3 403 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 CNOT7Q9UIV1 285 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms