RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LZTFL1Q9NQ48 299 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 BMP15O95972 392 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
VAPB-204ENST00000475243 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 TNRQ92752 1358 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 FBF1Q8TES7 1133 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 GUCA1BQ9UMX6 200 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
VAPB-204ENST00000475243 KRT79Q5XKE5 535 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 CCDC25Q86WR0 208 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
VAPB-204ENST00000475243 IL2RBP14784 551 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
VAPB-204ENST00000475243 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 GJA3Q9Y6H8 435 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 CCDC171Q6TFL3 1326 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 CTAGE15A4D2H0 777 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
VAPB-204ENST00000475243 CTAGE6Q86UF2 777 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 GPCPD1Q9NPB8 672 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 BACH1O14867 736 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 KIF5AQ12840 1032 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 KIF4AO95239 1232 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 CAVIN2O95810 425 aa12.41□□□□□ -0.42
VAPB-204ENST00000475243 HARSP12081 509 aaKnown RBP12.41□□□□□ -0.42
VAPB-204ENST00000475243 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
VAPB-204ENST00000475243 NOLC1Q14978 699 aaKnown RBP eCLIP12.41□□□□□ -0.42
VAPB-204ENST00000475243 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.42
VAPB-204ENST00000475243 TACC1O75410 805 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 CPA1P15085 419 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 TYRO3Q06418 890 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 DNAJC21Q5F1R6 531 aaKnown RBP12.4□□□□□ -0.42
VAPB-204ENST00000475243 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 CALML3P27482 149 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 ATRIPQ8WXE1 791 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 SREK1Q8WXA9 508 aaKnown RBP12.4□□□□□ -0.42
VAPB-204ENST00000475243 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 TOM1O60784 492 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 CCT6AP40227 531 aaKnown RBP12.4□□□□□ -0.42
VAPB-204ENST00000475243 ZNF174Q15697 407 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 SELENOSQ9BQE4 189 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
VAPB-204ENST00000475243 RAPGEF1Q13905 1077 aa12.4□□□□□ -0.43
VAPB-204ENST00000475243 IFNKQ9P0W0 207 aa12.4□□□□□ -0.43
VAPB-204ENST00000475243 TIMM10P62072 90 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 GNAT2P19087 354 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 TRAF1Q13077 416 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 DDX23Q9BUQ8 820 aaKnown RBP12.39□□□□□ -0.43
VAPB-204ENST00000475243 PTPDC1A2A3K4 754 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 CCDC6Q16204 474 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 LETM2Q2VYF4 491 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
VAPB-204ENST00000475243 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 KRT5P13647 590 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 ZBTB16Q05516 673 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 A0A1B0GVL5 298 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 PSMC4P43686 418 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
VAPB-204ENST00000475243 ZYXQ15942 572 aaKnown RBP12.38□□□□□ -0.43
VAPB-204ENST00000475243 ZNF569Q5MCW4 686 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 GNPATO15228 680 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 CHMP2AO43633 222 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 RAB3IL1Q8TBN0 382 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 CEP83Q9Y592 693 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 TAF12Q16514 161 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 NDC80O14777 642 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 RSPH14Q9UHP6 348 aa12.38□□□□□ -0.43
VAPB-204ENST00000475243 TLDC2A0PJX2 215 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 MBD4O95243 580 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 GNA11P29992 359 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 B4E1Z4 1266 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms