RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SNAP23O00161 211 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 CELF2O95319 508 aaKnown RBP11.87□□□□□ -0.51
PDPN-204ENST00000475043 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
PDPN-204ENST00000475043 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
PDPN-204ENST00000475043 VEGFBP49765 207 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
PDPN-204ENST00000475043 GRM1Q13255 1194 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 CST9Q5W186 159 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
PDPN-204ENST00000475043 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
PDPN-204ENST00000475043 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
PDPN-204ENST00000475043 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 CT47B1P0C2W7 299 aaPredicted RBP11.86□□□□□ -0.51
PDPN-204ENST00000475043 PLCG2P16885 1265 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 KRT26Q7Z3Y9 468 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
PDPN-204ENST00000475043 UTYO14607 1347 aa11.86□□□□□ -0.51
PDPN-204ENST00000475043 GTF2IP78347 998 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 DLK2Q6UY11 383 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 GMLQ99445 158 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 MYOZ2Q9NPC6 264 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
PDPN-204ENST00000475043 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 ZNF609O15014 1411 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
PDPN-204ENST00000475043 PCNTO95613 3336 aa11.85□□□□□ -0.51
PDPN-204ENST00000475043 ADM5C9JUS6 153 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
PDPN-204ENST00000475043 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDPN-204ENST00000475043 SCARF1Q14162 830 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 ANGEL2Q5VTE6 544 aaKnown RBP11.84□□□□□ -0.51
PDPN-204ENST00000475043 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
PDPN-204ENST00000475043 USP44Q9H0E7 712 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 CD209Q9NNX6 404 aa11.84□□□□□ -0.51
PDPN-204ENST00000475043 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
PDPN-204ENST00000475043 ECE1P42892 770 aa11.83□□□□□ -0.52
PDPN-204ENST00000475043 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
PDPN-204ENST00000475043 SAPCD2Q86UD0 394 aa11.83□□□□□ -0.52
PDPN-204ENST00000475043 ANKRD44Q8N8A2 993 aa11.83□□□□□ -0.52
PDPN-204ENST00000475043 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
PDPN-204ENST00000475043 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
PDPN-204ENST00000475043 API5Q9BZZ5 524 aaKnown RBP11.83□□□□□ -0.52
PDPN-204ENST00000475043 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
PDPN-204ENST00000475043 COL13A1Q5TAT6 717 aaPredicted RBP11.82□□□□□ -0.52
PDPN-204ENST00000475043 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
PDPN-204ENST00000475043 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
PDPN-204ENST00000475043 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
PDPN-204ENST00000475043 HDAC9Q9UKV0 1011 aa11.82□□□□□ -0.52
PDPN-204ENST00000475043 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
PDPN-204ENST00000475043 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
PDPN-204ENST00000475043 PSEN1P49768 467 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 UBE4AQ14139 1066 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 NBPF9Q3BBW0 867 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 C2orf69Q8N8R5 385 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 SCAF8Q9UPN6 1271 aaKnown RBP11.81□□□□□ -0.52
PDPN-204ENST00000475043 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 RIPOR2Q9Y4F9 1068 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 IRS2Q9Y4H2 1338 aa11.81□□□□□ -0.52
PDPN-204ENST00000475043 F8W031 263 aaPredicted RBP11.8□□□□□ -0.52
PDPN-204ENST00000475043 FOXN1O15353 648 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 SASH1O94885 1247 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 IL1R1P14778 569 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 GYG1P46976 350 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
PDPN-204ENST00000475043 HUNKP57058 714 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
PDPN-204ENST00000475043 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
PDPN-204ENST00000475043 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
PDPN-204ENST00000475043 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
PDPN-204ENST00000475043 THSD7BQ9C0I4 1608 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 WNT10BO00744 389 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 AOC2O75106 756 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 HIBADHP31937 336 aaKnown RBP11.79□□□□□ -0.52
PDPN-204ENST00000475043 MMP14P50281 582 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 CERS5Q8N5B7 392 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 HDAC5Q9UQL6 1122 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
PDPN-204ENST00000475043 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms