RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
RTN1-205ENST00000474911 PGAP2Q9UHJ9 254 aa16.49■□□□□ 0.23
RTN1-205ENST00000474911 AGBL3Q8NEM8 1001 aa16.48■□□□□ 0.23
RTN1-205ENST00000474911 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
RTN1-205ENST00000474911 IRS2Q9Y4H2 1338 aa16.48■□□□□ 0.23
RTN1-205ENST00000474911 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 MX1P20591 662 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 KCNJ4P48050 445 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 TFCP2Q12800 502 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
RTN1-205ENST00000474911 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 TXNRD3Q86VQ6 643 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
RTN1-205ENST00000474911 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
RTN1-205ENST00000474911 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 SALL3Q9BXA9 1300 aa16.47■□□□□ 0.23
RTN1-205ENST00000474911 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 TAF5LO75529 589 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 HIRAP54198 1017 aaPredicted RBP16.46■□□□□ 0.23
RTN1-205ENST00000474911 TRPM4Q8TD43 1214 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
RTN1-205ENST00000474911 AOX1Q06278 1338 aa16.46■□□□□ 0.23
RTN1-205ENST00000474911 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
RTN1-205ENST00000474911 KLRK1P26718 216 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 PDE1AP54750 535 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 AACSQ86V21 672 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 HELBQ8NG08 1087 aaPredicted RBP16.45■□□□□ 0.22
RTN1-205ENST00000474911 GMLQ99445 158 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 CEP126Q9P2H0 1117 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
RTN1-205ENST00000474911 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 ZNF280AP59817 542 aaPredicted RBP16.44■□□□□ 0.22
RTN1-205ENST00000474911 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 EAF2Q96CJ1 260 aaPredicted RBP16.44■□□□□ 0.22
RTN1-205ENST00000474911 CD209Q9NNX6 404 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
RTN1-205ENST00000474911 TTC41PQ6P2S7 1318 aa16.44■□□□□ 0.22
RTN1-205ENST00000474911 SNAP23O00161 211 aa16.43■□□□□ 0.22
RTN1-205ENST00000474911 MMP14P50281 582 aa16.43■□□□□ 0.22
RTN1-205ENST00000474911 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
RTN1-205ENST00000474911 EGFRP00533 1210 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 IL1R1P14778 569 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
RTN1-205ENST00000474911 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
RTN1-205ENST00000474911 ERC2O15083 957 aa16.41■□□□□ 0.22
RTN1-205ENST00000474911 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
RTN1-205ENST00000474911 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
RTN1-205ENST00000474911 ECHDC1Q9NTX5 307 aa16.41■□□□□ 0.22
RTN1-205ENST00000474911 ARAP2Q8WZ64 1704 aa16.41■□□□□ 0.22
RTN1-205ENST00000474911 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
RTN1-205ENST00000474911 CNTNAP1P78357 1384 aa16.4■□□□□ 0.22
RTN1-205ENST00000474911 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
RTN1-205ENST00000474911 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
RTN1-205ENST00000474911 A0A1B0GUL7 405 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 TRAF5O00463 557 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
RTN1-205ENST00000474911 PDE8BO95263 885 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
RTN1-205ENST00000474911 GTF2IP78347 998 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 RBM26Q5T8P6 1007 aaKnown RBP16.39■□□□□ 0.21
RTN1-205ENST00000474911 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 OGFOD1Q8N543 542 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 PI4K2BQ8TCG2 481 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
RTN1-205ENST00000474911 TLR7Q9NYK1 1049 aaKnown RBP16.39■□□□□ 0.21
RTN1-205ENST00000474911 RASSF10A6NK89 507 aa16.38■□□□□ 0.21
RTN1-205ENST00000474911 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
RTN1-205ENST00000474911 FMR1Q06787 632 aaKnown RBP eCLIP16.38■□□□□ 0.21
RTN1-205ENST00000474911 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
RTN1-205ENST00000474911 CST9Q5W186 159 aa16.38■□□□□ 0.21
RTN1-205ENST00000474911 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
RTN1-205ENST00000474911 DCPSQ96C86 337 aaKnown RBP16.38■□□□□ 0.21
RTN1-205ENST00000474911 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
RTN1-205ENST00000474911 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
RTN1-205ENST00000474911 MKRN1Q9UHC7 482 aaKnown RBP16.37■□□□□ 0.21
RTN1-205ENST00000474911 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
RTN1-205ENST00000474911 ECM29Q5VYK3 1845 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms