RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 LEMD3Q9Y2U8 911 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 CHD4Q14839 1912 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 DUOX1Q9NRD9 1551 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 ZAP70P43403 619 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 TMC4Q7Z404 712 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 CNTROBQ8N137 903 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 SPON1Q9HCB6 807 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 ESPNB1AK53 854 aa24.95■■□□□ 1.58
SMIM11A-204ENST00000474455 GOLIM4O00461 696 aa24.95■■□□□ 1.58
SMIM11A-204ENST00000474455 ARID4AP29374 1257 aaPredicted RBP24.95■■□□□ 1.58
SMIM11A-204ENST00000474455 GGA1Q9UJY5 639 aa24.95■■□□□ 1.58
SMIM11A-204ENST00000474455 C21orf2O43822 256 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 TGFB2P61812 414 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 RASGRF1Q13972 1273 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 TTLL6Q8N841 843 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 C6orf229H3BNL8 230 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 ATP2B4P23634 1241 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 FBXO33Q7Z6M2 555 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 MPNDQ8N594 471 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 PAG1Q9NWQ8 432 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 HMG20BQ9P0W2 317 aa24.94■■□□□ 1.58
SMIM11A-204ENST00000474455 NLGN2Q8NFZ4 835 aa24.93■■□□□ 1.58
SMIM11A-204ENST00000474455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.93■■□□□ 1.58
SMIM11A-204ENST00000474455 EVI5LQ96CN4 794 aa24.93■■□□□ 1.58
SMIM11A-204ENST00000474455 TRIM44Q96DX7 344 aaPredicted RBP24.93■■□□□ 1.58
SMIM11A-204ENST00000474455 MYH7P12883 1935 aa24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 SLFNL1Q499Z3 407 aa24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 CAVIN4Q5BKX8 364 aa24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 ZNF512BQ96KM6 892 aaPredicted RBP24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 IL25Q9H293 177 aa24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 CYP2E1P05181 493 aaPredicted RBP24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 CHMLP26374 656 aa24.92■■□□□ 1.58
SMIM11A-204ENST00000474455 COL1A1P02452 1464 aaPredicted RBP24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 RIMBP2O15034 1052 aa24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 KLHL40Q2TBA0 621 aa24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 DPP8Q6V1X1 898 aaPredicted RBP24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 VPS37DQ86XT2 251 aa24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 NAP1L5Q96NT1 182 aaPredicted RBP24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 CD2APQ9Y5K6 639 aa24.91■■□□□ 1.58
SMIM11A-204ENST00000474455 CD2BP2O95400 341 aaKnown RBP24.9■■□□□ 1.58
SMIM11A-204ENST00000474455 UQCRFS1P1P0C7P4 283 aa24.9■■□□□ 1.58
SMIM11A-204ENST00000474455 HIBADHP31937 336 aaKnown RBP24.9■■□□□ 1.58
SMIM11A-204ENST00000474455 NUCB2P80303 420 aa24.9■■□□□ 1.58
SMIM11A-204ENST00000474455 FSD1Q9BTV5 496 aa24.9■■□□□ 1.58
SMIM11A-204ENST00000474455 CCDC173Q0VFZ6 552 aa24.89■■□□□ 1.58
SMIM11A-204ENST00000474455 SPATA5Q8NB90 893 aa24.89■■□□□ 1.58
SMIM11A-204ENST00000474455 PIM2Q9P1W9 311 aa24.89■■□□□ 1.58
SMIM11A-204ENST00000474455 JAG2Q9Y219 1238 aa24.89■■□□□ 1.58
SMIM11A-204ENST00000474455 SNED1Q8TER0 1413 aa24.89■■□□□ 1.58
SMIM11A-204ENST00000474455 GAS2L3Q86XJ1 694 aa24.88■■□□□ 1.57
SMIM11A-204ENST00000474455 PPP1R9BQ96SB3 815 aa24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 TMX4Q9H1E5 349 aaPredicted RBP24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 PIH1D3Q9NQM4 214 aaKnown RBP24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 BAG4O95429 457 aaKnown RBP24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 KBTBD3Q8NAB2 608 aa24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 DOCK2Q92608 1830 aa24.87■■□□□ 1.57
SMIM11A-204ENST00000474455 CWC27Q6UX04 472 aaKnown RBP24.86■■□□□ 1.57
SMIM11A-204ENST00000474455 C15orf52Q6ZUT6 534 aaKnown RBP24.86■■□□□ 1.57
SMIM11A-204ENST00000474455 FAM227BQ96M60 508 aa24.86■■□□□ 1.57
SMIM11A-204ENST00000474455 CWC22Q9HCG8 908 aaKnown RBP24.86■■□□□ 1.57
SMIM11A-204ENST00000474455 CASC1Q6TDU7 716 aa24.85■■□□□ 1.57
SMIM11A-204ENST00000474455 FHDC1Q9C0D6 1143 aaPredicted RBP24.85■■□□□ 1.57
SMIM11A-204ENST00000474455 MED23Q9ULK4 1368 aa24.84■■□□□ 1.57
SMIM11A-204ENST00000474455 ANP32BQ92688 251 aaKnown RBP24.84■■□□□ 1.57
SMIM11A-204ENST00000474455 CD209Q9NNX6 404 aa24.84■■□□□ 1.57
SMIM11A-204ENST00000474455 GNL3LQ9NVN8 582 aaKnown RBP24.84■■□□□ 1.57
SMIM11A-204ENST00000474455 CHAF1AQ13111 956 aaPredicted RBP24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 NMIQ13287 307 aaPredicted RBP24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 DOK7Q18PE1 504 aa24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 WASHC4Q2M389 1173 aa24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 USP26Q9BXU7 913 aa24.83■■□□□ 1.57
SMIM11A-204ENST00000474455 ZNF445P59923 1031 aa24.83■■□□□ 1.56
SMIM11A-204ENST00000474455 ZNF804AQ7Z570 1209 aa24.83■■□□□ 1.56
SMIM11A-204ENST00000474455 TDRD7Q8NHU6 1098 aaKnown RBP24.83■■□□□ 1.56
SMIM11A-204ENST00000474455 SEC62Q99442 399 aaKnown RBP24.83■■□□□ 1.56
SMIM11A-204ENST00000474455 ESYT1Q9BSJ8 1104 aa24.83■■□□□ 1.56
SMIM11A-204ENST00000474455 FER1L6Q2WGJ9 1857 aa24.82■■□□□ 1.56
SMIM11A-204ENST00000474455 SCN9AQ15858 1988 aa24.82■■□□□ 1.56
SMIM11A-204ENST00000474455 A0A0D9SFI3 127 aa24.82■■□□□ 1.56
SMIM11A-204ENST00000474455 ZC3H12CQ9C0D7 883 aaKnown RBP24.82■■□□□ 1.56
SMIM11A-204ENST00000474455 BCS1LQ9Y276 419 aa24.82■■□□□ 1.56
SMIM11A-204ENST00000474455 RTFDC1Q9BY42 306 aaPredicted RBP24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 DIAPH3Q9NSV4 1193 aa24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 DENND2AQ9ULE3 1009 aa24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 IDH1O75874 414 aaKnown RBP24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 FOXD4L1Q9NU39 408 aa24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 ABCF2Q9UG63 623 aa24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 DDX49Q9Y6V7 483 aaKnown RBP24.81■■□□□ 1.56
SMIM11A-204ENST00000474455 NASPP49321 788 aaPredicted RBP24.8■■□□□ 1.56
SMIM11A-204ENST00000474455 AOC3Q16853 763 aa24.8■■□□□ 1.56
SMIM11A-204ENST00000474455 CCDC93Q567U6 631 aa24.8■■□□□ 1.56
SMIM11A-204ENST00000474455 IL1R1P14778 569 aa24.79■■□□□ 1.56
SMIM11A-204ENST00000474455 CC2D2BQ6DHV5 1058 aa24.79■■□□□ 1.56
SMIM11A-204ENST00000474455 DBNDD1Q9H9R9 158 aa24.79■■□□□ 1.56
SMIM11A-204ENST00000474455 KCNQ5Q9NR82 932 aa24.79■■□□□ 1.56
SMIM11A-204ENST00000474455 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
SMIM11A-204ENST00000474455 ARFGEF1Q9Y6D6 1849 aa24.78■■□□□ 1.56
SMIM11A-204ENST00000474455 SOCS7O14512 581 aa24.78■■□□□ 1.56
SMIM11A-204ENST00000474455 SGSM2O43147 1006 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms