RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CFAP161Q6P656 301 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 CPLX2Q6PUV4 134 aaKnown RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 SLAIN1Q8ND83 568 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 RSAD2Q8WXG1 361 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 E2F7Q96AV8 911 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 BEGAINQ9BUH8 593 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 TSPY26PQ9H489 355 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ZSWIM6Q9HCJ5 1215 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 NGRNQ9NPE2 291 aaKnown RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 ANKIB1Q9P2G1 1089 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ATP1B4Q9UN42 357 aaPredicted RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 JRKLQ9Y4A0 524 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SPO11Q9Y5K1 396 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 NINLQ9Y2I6 1382 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 TBKBP1A7MCY6 615 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ENPP3O14638 875 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 HNRNPCP07910 306 aaKnown RBP eCLIP4.05□□□□□ -1.76
UBR3-208ENST00000474426 CSE1LP55060 971 aaKnown RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 MDM2Q00987 491 aaPredicted RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 DEUP1Q05D60 604 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 LAPTM5Q13571 262 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 MRPL58Q14197 206 aaKnown RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 SART3Q15020 963 aaKnown RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 AMHR2Q16671 573 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 WDR45BQ5MNZ6 344 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SRLQ86TD4 932 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 PGBD3Q8N328 593 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 NLRP7Q8WX94 980 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 HVCN1Q96D96 273 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ZBTB10Q96DT7 871 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ALPK1Q96QP1 1244 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 CCDC68Q9H2F9 335 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ACBD3Q9H3P7 528 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 KANSL2Q9H9L4 492 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 PPP1R9AQ9ULJ8 1098 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 C2CD2Q9Y426 696 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SPDYE2BA6NHP3 402 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SPDYE5A6NIY4 337 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SPDYE6P0CI01 402 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 IDEP14735 1019 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 POU3F3P20264 500 aaPredicted RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 SERPINB4P48594 390 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 PIP4K2BP78356 416 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 IQCB1Q15051 598 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 NFE2Q16621 373 aaPredicted RBP4.05□□□□□ -1.76
UBR3-208ENST00000474426 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 GRAMD1BQ3KR37 738 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 SPDYE2Q495Y8 402 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 FAM83BQ5T0W9 1011 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 ARMC4Q5T2S8 1044 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 CRACR2AQ9BSW2 395 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 RASSF4Q9H2L5 321 aa4.05□□□□□ -1.76
UBR3-208ENST00000474426 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 TPP2P29144 1249 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 DNAJA1P31689 397 aaKnown RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 USP11P51784 963 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 KIF11P52732 1056 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 POSTNQ15063 836 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 OLFML1Q6UWY5 402 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 CCDC129Q6ZRS4 1044 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 AKNAQ7Z591 1439 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 C14orf80Q86SX3 495 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 DAAM2Q86T65 1068 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 FERMT3Q86UX7 667 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 RASSF3Q86WH2 238 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 CCDC65Q8IXS2 484 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 IFNL3Q8IZI9 196 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 STK11IPQ8N1F8 1099 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 RBM17Q96I25 401 aaKnown RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 MAK16Q9BXY0 300 aaKnown RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 FBXL5Q9UKA1 691 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 TMEM94Q12767 1356 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 SOWAHDA6NJG2 315 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 C2orf81A6NN90 581 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 KIAA0754O94854 1291 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 RAC2P15153 192 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 CASP2P42575 452 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 CDKN1CP49918 316 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 FOXK1P85037 733 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 GOLGA2Q08379 1002 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 PPP2R5CQ13362 524 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 BRD3Q15059 726 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 MAP7D1Q3KQU3 841 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 PEX5LQ8IYB4 626 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 JPH3Q8WXH2 748 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 GMLQ99445 158 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 FANCFQ9NPI8 374 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 TYW1Q9NV66 732 aaKnown RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 PIH1D1Q9NWS0 290 aaKnown RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 C9orf78Q9NZ63 289 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 MKL2Q9ULH7 1088 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 CNPY2Q9Y2B0 182 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 ATP6V0A2Q9Y487 856 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 UQCRHLA0A096LP55 91 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 BHMG1C9JSJ3 638 aaPredicted RBP4.04□□□□□ -1.76
UBR3-208ENST00000474426 TSPAN6O43657 245 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 TCEA3O75764 348 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 PYGLP06737 847 aa4.04□□□□□ -1.76
UBR3-208ENST00000474426 UQCRHP07919 91 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms