RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 L3MBTL3Q96JM7 780 aaPredicted RBP22.27■■□□□ 1.16
SNRPB-203ENST00000474384 POTECB2RU33 542 aa22.26■■□□□ 1.15
SNRPB-203ENST00000474384 SCNN1DP51172 638 aa22.26■■□□□ 1.15
SNRPB-203ENST00000474384 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
SNRPB-203ENST00000474384 FAM205AQ6ZU69 1335 aa22.26■■□□□ 1.15
SNRPB-203ENST00000474384 WDR90Q96KV7 1748 aa22.26■■□□□ 1.15
SNRPB-203ENST00000474384 ZNF646O15015 1829 aaPredicted RBP22.25■■□□□ 1.15
SNRPB-203ENST00000474384 IFIT2P09913 472 aaKnown RBP22.25■■□□□ 1.15
SNRPB-203ENST00000474384 RPS12P25398 132 aaKnown RBP22.25■■□□□ 1.15
SNRPB-203ENST00000474384 TTC39AQ5SRH9 613 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 ANKRD45Q5TZF3 282 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 CERS5Q8N5B7 392 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 AGBL3Q8NEM8 1001 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 DPF2Q92785 391 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 GMLQ99445 158 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 GPRC5DQ9NZD1 345 aa22.24■■□□□ 1.15
SNRPB-203ENST00000474384 SHTN1A0MZ66 631 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 SEMA3EO15041 775 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 VEGFAP15692 232 aaPredicted RBP22.23■■□□□ 1.15
SNRPB-203ENST00000474384 LMOD1P29536 600 aaPredicted RBP22.23■■□□□ 1.15
SNRPB-203ENST00000474384 EPS15P42566 896 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 RASGRF1Q13972 1273 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 CNOT7Q9UIV1 285 aaKnown RBP22.23■■□□□ 1.15
SNRPB-203ENST00000474384 HACL1Q9UJ83 578 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 DENND2AQ9ULE3 1009 aa22.23■■□□□ 1.15
SNRPB-203ENST00000474384 COL1A1P02452 1464 aaPredicted RBP22.22■■□□□ 1.15
SNRPB-203ENST00000474384 MYH13Q9UKX3 1938 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 UQCRFS1P1P0C7P4 283 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 ARID4AP29374 1257 aaPredicted RBP22.22■■□□□ 1.15
SNRPB-203ENST00000474384 MFSD14BQ5SR56 506 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 B4GALNT3Q6L9W6 998 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 MYO3BQ8WXR4 1341 aa22.22■■□□□ 1.15
SNRPB-203ENST00000474384 FKBP1AP62942 108 aaKnown RBP22.21■■□□□ 1.15
SNRPB-203ENST00000474384 SCARF1Q14162 830 aa22.21■■□□□ 1.15
SNRPB-203ENST00000474384 PI16Q6UXB8 463 aa22.21■■□□□ 1.15
SNRPB-203ENST00000474384 MICALL2Q8IY33 904 aa22.21■■□□□ 1.15
SNRPB-203ENST00000474384 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
SNRPB-203ENST00000474384 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
SNRPB-203ENST00000474384 ZBTB47Q9UFB7 747 aaPredicted RBP22.21■■□□□ 1.15
SNRPB-203ENST00000474384 SCN4AP35499 1836 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 ZBTB22O15209 634 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 USP17L8P0C7I0 530 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 MCAMP43121 646 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 KIAA0825Q8IV33 1275 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 WDR66Q8TBY9 1149 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 TBC1D22AQ8WUA7 517 aa22.2■■□□□ 1.14
SNRPB-203ENST00000474384 ZNF512BQ96KM6 892 aaPredicted RBP22.2■■□□□ 1.14
SNRPB-203ENST00000474384 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
SNRPB-203ENST00000474384 F8W031 263 aaPredicted RBP22.19■■□□□ 1.14
SNRPB-203ENST00000474384 H7C1D1 291 aa22.19■■□□□ 1.14
SNRPB-203ENST00000474384 EPHX2P34913 555 aa22.19■■□□□ 1.14
SNRPB-203ENST00000474384 GRIK5Q16478 980 aa22.19■■□□□ 1.14
SNRPB-203ENST00000474384 SPATA5Q8NB90 893 aa22.19■■□□□ 1.14
SNRPB-203ENST00000474384 SNRKQ9NRH2 765 aa22.19■■□□□ 1.14
SNRPB-203ENST00000474384 PDS5AQ29RF7 1337 aaKnown RBP22.17■■□□□ 1.14
SNRPB-203ENST00000474384 KIF3CO14782 793 aa22.17■■□□□ 1.14
SNRPB-203ENST00000474384 ZNF280AP59817 542 aaPredicted RBP22.17■■□□□ 1.14
SNRPB-203ENST00000474384 RBM26Q5T8P6 1007 aaKnown RBP22.17■■□□□ 1.14
SNRPB-203ENST00000474384 SAMD7Q7Z3H4 446 aa22.17■■□□□ 1.14
SNRPB-203ENST00000474384 OGFOD1Q8N543 542 aa22.17■■□□□ 1.14
SNRPB-203ENST00000474384 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
SNRPB-203ENST00000474384 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
SNRPB-203ENST00000474384 NUCB1Q02818 461 aa22.16■■□□□ 1.14
SNRPB-203ENST00000474384 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
SNRPB-203ENST00000474384 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
SNRPB-203ENST00000474384 SALL1Q9NSC2 1324 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 EGFRP00533 1210 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 ZAP70P43403 619 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 TBC1D10BQ4KMP7 808 aaPredicted RBP22.15■■□□□ 1.14
SNRPB-203ENST00000474384 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
SNRPB-203ENST00000474384 TBC1D9Q6ZT07 1266 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 CHD1LQ86WJ1 897 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 ABCF2Q9UG63 623 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 HDAC9Q9UKV0 1011 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 NDUFB9Q9Y6M9 179 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 AKAP11Q9UKA4 1901 aa22.15■■□□□ 1.14
SNRPB-203ENST00000474384 ATP5JP18859 108 aa22.14■■□□□ 1.13
SNRPB-203ENST00000474384 USP50Q70EL3 339 aaPredicted RBP22.14■■□□□ 1.13
SNRPB-203ENST00000474384 TRPM4Q8TD43 1214 aa22.14■■□□□ 1.13
SNRPB-203ENST00000474384 MYOZ2Q9NPC6 264 aa22.14■■□□□ 1.13
SNRPB-203ENST00000474384 ECHDC1Q9NTX5 307 aa22.14■■□□□ 1.13
SNRPB-203ENST00000474384 CYP2E1P05181 493 aaPredicted RBP22.13■■□□□ 1.13
SNRPB-203ENST00000474384 POTEIP0CG38 1075 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 POTEJP0CG39 1038 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 PRDX5P30044 214 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 HIRAP54198 1017 aaPredicted RBP22.13■■□□□ 1.13
SNRPB-203ENST00000474384 TSHZ3Q63HK5 1081 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 PNMA8AQ86V59 439 aaPredicted RBP22.13■■□□□ 1.13
SNRPB-203ENST00000474384 ZGPATQ8N5A5 531 aaKnown RBP22.13■■□□□ 1.13
SNRPB-203ENST00000474384 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 CCDC136Q96JN2 1154 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 SUGT1Q9Y2Z0 365 aa22.13■■□□□ 1.13
SNRPB-203ENST00000474384 LDHBP07195 334 aaKnown RBP22.12■■□□□ 1.13
SNRPB-203ENST00000474384 MMP14P50281 582 aa22.12■■□□□ 1.13
SNRPB-203ENST00000474384 KIF4BQ2VIQ3 1234 aa22.12■■□□□ 1.13
SNRPB-203ENST00000474384 ERICH6BQ5W0A0 696 aa22.12■■□□□ 1.13
SNRPB-203ENST00000474384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNRPB-203ENST00000474384 BOLA2Q9H3K6 86 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms