RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 PI16Q6UXB8 463 aa24.61■■□□□ 1.53
CDHR3-210ENST00000474330 C15orf52Q6ZUT6 534 aaKnown RBP24.61■■□□□ 1.53
CDHR3-210ENST00000474330 SPATA5Q8NB90 893 aa24.61■■□□□ 1.53
CDHR3-210ENST00000474330 GPBP1L1Q9HC44 474 aaPredicted RBP24.61■■□□□ 1.53
CDHR3-210ENST00000474330 LTBP3Q9NS15 1303 aa24.61■■□□□ 1.53
CDHR3-210ENST00000474330 KLRK1P26718 216 aa24.61■■□□□ 1.53
CDHR3-210ENST00000474330 SNED1Q8TER0 1413 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 CYP2E1P05181 493 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-210ENST00000474330 SOGA3Q5TF21 947 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 VPS37DQ86XT2 251 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 USP26Q9BXU7 913 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 IL25Q9H293 177 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 GGA1Q9UJY5 639 aa24.6■■□□□ 1.53
CDHR3-210ENST00000474330 HIBADHP31937 336 aaKnown RBP24.59■■□□□ 1.53
CDHR3-210ENST00000474330 RBM25P49756 843 aaKnown RBP24.59■■□□□ 1.53
CDHR3-210ENST00000474330 NMIQ13287 307 aaPredicted RBP24.59■■□□□ 1.53
CDHR3-210ENST00000474330 MYH7P12883 1935 aa24.59■■□□□ 1.53
CDHR3-210ENST00000474330 TIAM2Q8IVF5 1701 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 RAD50Q92878 1312 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 SEMA3EO15041 775 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 EPB41L2O43491 1005 aaKnown RBP24.58■■□□□ 1.53
CDHR3-210ENST00000474330 LRRFIP1Q32MZ4 808 aaKnown RBP24.58■■□□□ 1.53
CDHR3-210ENST00000474330 CCDC93Q567U6 631 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 FAM227BQ96M60 508 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
CDHR3-210ENST00000474330 DUOX1Q9NRD9 1551 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 UFL1O94874 794 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 TXNRD3Q86VQ6 643 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 TBC1D16Q8TBP0 767 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 CC2D2BQ6DHV5 1058 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 MPNDQ8N594 471 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 MYH13Q9UKX3 1938 aa24.57■■□□□ 1.52
CDHR3-210ENST00000474330 MYO5AQ9Y4I1 1855 aaKnown RBP24.56■■□□□ 1.52
CDHR3-210ENST00000474330 DOCK2Q92608 1830 aa24.56■■□□□ 1.52
CDHR3-210ENST00000474330 A0A0D9SFI3 127 aa24.56■■□□□ 1.52
CDHR3-210ENST00000474330 ZFYP08048 801 aaPredicted RBP24.56■■□□□ 1.52
CDHR3-210ENST00000474330 POLLQ9UGP5 575 aa24.56■■□□□ 1.52
CDHR3-210ENST00000474330 DENND2AQ9ULE3 1009 aa24.56■■□□□ 1.52
CDHR3-210ENST00000474330 RNF113AO15541 343 aaKnown RBP24.55■■□□□ 1.52
CDHR3-210ENST00000474330 DPP8Q6V1X1 898 aaPredicted RBP24.55■■□□□ 1.52
CDHR3-210ENST00000474330 ANO2Q9NQ90 1003 aa24.55■■□□□ 1.52
CDHR3-210ENST00000474330 PIH1D3Q9NQM4 214 aaKnown RBP24.55■■□□□ 1.52
CDHR3-210ENST00000474330 PDS5AQ29RF7 1337 aaKnown RBP24.55■■□□□ 1.52
CDHR3-210ENST00000474330 KIF3CO14782 793 aa24.54■■□□□ 1.52
CDHR3-210ENST00000474330 ANP32AP39687 249 aaKnown RBP24.54■■□□□ 1.52
CDHR3-210ENST00000474330 RTKN2Q8IZC4 609 aa24.54■■□□□ 1.52
CDHR3-210ENST00000474330 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.54■■□□□ 1.52
CDHR3-210ENST00000474330 ZC3H4Q9UPT8 1303 aaKnown RBP24.54■■□□□ 1.52
CDHR3-210ENST00000474330 GRIPAP1Q4V328 841 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 ZSCAN25Q6NSZ9 544 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 KIAA1211Q6ZU35 1233 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 HELLSQ9NRZ9 838 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 IQSEC3Q9UPP2 1182 aaPredicted RBP24.53■■□□□ 1.52
CDHR3-210ENST00000474330 MED23Q9ULK4 1368 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 C1QTNF8P60827 252 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 MCMDC2Q4G0Z9 681 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 ZMYM1Q5SVZ6 1142 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 ZNF804AQ7Z570 1209 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 NMRK2Q9NPI5 230 aa24.53■■□□□ 1.52
CDHR3-210ENST00000474330 COL1A1P02452 1464 aaPredicted RBP24.52■■□□□ 1.52
CDHR3-210ENST00000474330 C6orf229H3BNL8 230 aa24.52■■□□□ 1.52
CDHR3-210ENST00000474330 CHGBP05060 677 aa24.52■■□□□ 1.52
CDHR3-210ENST00000474330 LSG1Q9H089 658 aaKnown RBP24.52■■□□□ 1.52
CDHR3-210ENST00000474330 ZNF277Q9NRM2 450 aaPredicted RBP24.52■■□□□ 1.52
CDHR3-210ENST00000474330 TDRD7Q8NHU6 1098 aaKnown RBP24.51■■□□□ 1.51
CDHR3-210ENST00000474330 GPR101Q96P66 508 aaPredicted RBP24.51■■□□□ 1.51
CDHR3-210ENST00000474330 FRAT2O75474 233 aaPredicted RBP24.5■■□□□ 1.51
CDHR3-210ENST00000474330 ADD2P35612 726 aa24.5■■□□□ 1.51
CDHR3-210ENST00000474330 WASHC4Q2M389 1173 aa24.5■■□□□ 1.51
CDHR3-210ENST00000474330 GLTPD2A6NH11 291 aa24.5■■□□□ 1.51
CDHR3-210ENST00000474330 IDH1O75874 414 aaKnown RBP24.5■■□□□ 1.51
CDHR3-210ENST00000474330 MAP3K12Q12852 859 aa24.5■■□□□ 1.51
CDHR3-210ENST00000474330 SEC62Q99442 399 aaKnown RBP24.5■■□□□ 1.51
CDHR3-210ENST00000474330 PSMD1Q99460 953 aa24.5■■□□□ 1.51
CDHR3-210ENST00000474330 UBE3CQ15386 1083 aa24.49■■□□□ 1.51
CDHR3-210ENST00000474330 SLFNL1Q499Z3 407 aa24.49■■□□□ 1.51
CDHR3-210ENST00000474330 SLC9C2Q5TAH2 1124 aa24.49■■□□□ 1.51
CDHR3-210ENST00000474330 ZNF589Q86UQ0 364 aaPredicted RBP24.49■■□□□ 1.51
CDHR3-210ENST00000474330 APPBP2Q92624 585 aa24.49■■□□□ 1.51
CDHR3-210ENST00000474330 CD209Q9NNX6 404 aa24.49■■□□□ 1.51
CDHR3-210ENST00000474330 IL1R1P14778 569 aa24.48■■□□□ 1.51
CDHR3-210ENST00000474330 RTFDC1Q9BY42 306 aaPredicted RBP24.48■■□□□ 1.51
CDHR3-210ENST00000474330 CCDC171Q6TFL3 1326 aa24.48■■□□□ 1.51
CDHR3-210ENST00000474330 EYA3Q99504 573 aa24.47■■□□□ 1.51
CDHR3-210ENST00000474330 RRAGCQ9HB90 399 aa24.47■■□□□ 1.51
CDHR3-210ENST00000474330 PDE6AP16499 860 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 MCCP23508 829 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 PTH1RQ03431 593 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 SUPT20HQ8NEM7 779 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 OSBP2Q969R2 916 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 ZC3H12CQ9C0D7 883 aaKnown RBP24.46■■□□□ 1.51
CDHR3-210ENST00000474330 LRP2BPQ9P2M1 347 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 MAST3O60307 1309 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 COL4A5P29400 1685 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 TCRBV5S4A2TA0A5A2 114 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 IARSP41252 1262 aaKnown RBP24.46■■□□□ 1.51
CDHR3-210ENST00000474330 MAP4K1Q92918 833 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 KIF2CQ99661 725 aa24.46■■□□□ 1.51
CDHR3-210ENST00000474330 HSPA4P34932 840 aa24.45■■□□□ 1.5
CDHR3-210ENST00000474330 COA1Q9GZY4 146 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms