RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 ECM29Q5VYK3 1845 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 WNT10BO00744 389 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 SASH1O94885 1247 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 PRAMEF18Q5VWM3 479 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 MOB2Q70IA6 237 aa20.49■□□□□ 0.87
CPA4-205ENST00000474254 ZNF594Q96JF6 807 aaPredicted RBP20.49■□□□□ 0.87
CPA4-205ENST00000474254 BICC1Q9H694 974 aaKnown RBP20.49■□□□□ 0.87
CPA4-205ENST00000474254 LDHAL6AQ6ZMR3 332 aa20.48■□□□□ 0.87
CPA4-205ENST00000474254 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
CPA4-205ENST00000474254 APOBEC3FQ8IUX4 373 aaKnown RBP20.48■□□□□ 0.87
CPA4-205ENST00000474254 KIAA0825Q8IV33 1275 aa20.48■□□□□ 0.87
CPA4-205ENST00000474254 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
CPA4-205ENST00000474254 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
CPA4-205ENST00000474254 TAF5LO75529 589 aa20.47■□□□□ 0.87
CPA4-205ENST00000474254 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
CPA4-205ENST00000474254 GTF2IP78347 998 aa20.47■□□□□ 0.87
CPA4-205ENST00000474254 CTU1Q7Z7A3 348 aaKnown RBP20.47■□□□□ 0.87
CPA4-205ENST00000474254 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
CPA4-205ENST00000474254 SNAP23O00161 211 aa20.46■□□□□ 0.87
CPA4-205ENST00000474254 ARMC9Q7Z3E5 817 aa20.46■□□□□ 0.87
CPA4-205ENST00000474254 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
CPA4-205ENST00000474254 NOB1Q9ULX3 412 aaKnown RBP20.46■□□□□ 0.87
CPA4-205ENST00000474254 MYH13Q9UKX3 1938 aa20.46■□□□□ 0.87
CPA4-205ENST00000474254 KIF16BQ96L93 1317 aa20.46■□□□□ 0.87
CPA4-205ENST00000474254 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
CPA4-205ENST00000474254 CD209Q9NNX6 404 aa20.45■□□□□ 0.86
CPA4-205ENST00000474254 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
CPA4-205ENST00000474254 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
CPA4-205ENST00000474254 SREBF2Q12772 1141 aa20.43■□□□□ 0.86
CPA4-205ENST00000474254 MKRN3Q13064 507 aaKnown RBP20.43■□□□□ 0.86
CPA4-205ENST00000474254 PRKG1Q13976 671 aa20.43■□□□□ 0.86
CPA4-205ENST00000474254 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
CPA4-205ENST00000474254 ZNF804AQ7Z570 1209 aa20.43■□□□□ 0.86
CPA4-205ENST00000474254 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
CPA4-205ENST00000474254 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
CPA4-205ENST00000474254 TBC1D8O95759 1140 aa20.41■□□□□ 0.86
CPA4-205ENST00000474254 SOX10P56693 466 aa20.41■□□□□ 0.86
CPA4-205ENST00000474254 ARHGAP45Q92619 1136 aa20.41■□□□□ 0.86
CPA4-205ENST00000474254 ANGEL1Q9UNK9 670 aaKnown RBP20.41■□□□□ 0.86
CPA4-205ENST00000474254 MYO1BO43795 1136 aa20.4■□□□□ 0.86
CPA4-205ENST00000474254 PLIN1O60240 522 aa20.4■□□□□ 0.86
CPA4-205ENST00000474254 IL1R1P14778 569 aa20.4■□□□□ 0.86
CPA4-205ENST00000474254 PTPN12Q05209 780 aaKnown RBP20.4■□□□□ 0.86
CPA4-205ENST00000474254 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
CPA4-205ENST00000474254 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
CPA4-205ENST00000474254 ZBED3Q96IU2 234 aaPredicted RBP20.4■□□□□ 0.86
CPA4-205ENST00000474254 F8W031 263 aaPredicted RBP20.39■□□□□ 0.85
CPA4-205ENST00000474254 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
CPA4-205ENST00000474254 TM4SF4P48230 202 aa20.39■□□□□ 0.85
CPA4-205ENST00000474254 PKN2Q16513 984 aaKnown RBP20.39■□□□□ 0.85
CPA4-205ENST00000474254 ZNF296Q8WUU4 475 aaPredicted RBP20.39■□□□□ 0.85
CPA4-205ENST00000474254 LRRC24Q50LG9 513 aa20.38■□□□□ 0.85
CPA4-205ENST00000474254 DEFB129Q9H1M3 183 aa20.38■□□□□ 0.85
CPA4-205ENST00000474254 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
CPA4-205ENST00000474254 PPP2R3BQ9Y5P8 575 aa20.38■□□□□ 0.85
CPA4-205ENST00000474254 RFX5P48382 616 aaPredicted RBP20.37■□□□□ 0.85
CPA4-205ENST00000474254 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
CPA4-205ENST00000474254 CERS5Q8N5B7 392 aa20.37■□□□□ 0.85
CPA4-205ENST00000474254 VGLL2Q8N8G2 317 aa20.37■□□□□ 0.85
CPA4-205ENST00000474254 MTMR14Q8NCE2 650 aa20.37■□□□□ 0.85
CPA4-205ENST00000474254 KLHDC4Q8TBB5 520 aa20.37■□□□□ 0.85
CPA4-205ENST00000474254 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 TNRC18O15417 2968 aaPredicted RBP20.36■□□□□ 0.85
CPA4-205ENST00000474254 GPR25O00155 361 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
CPA4-205ENST00000474254 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.85
CPA4-205ENST00000474254 FKBP1AP62942 108 aaKnown RBP20.36■□□□□ 0.85
CPA4-205ENST00000474254 CFAP100Q494V2 611 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 METTL24Q5JXM2 366 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 HPS5Q9UPZ3 1129 aa20.36■□□□□ 0.85
CPA4-205ENST00000474254 BCAR3O75815 825 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 TRIM27P14373 513 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 NOM1Q5C9Z4 860 aaKnown RBP20.35■□□□□ 0.85
CPA4-205ENST00000474254 LDLRAD1Q5T700 205 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 SPRYD7Q5W111 196 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 SLC10A4Q96EP9 437 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 MEIS3Q99687 375 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 JAG2Q9Y219 1238 aa20.35■□□□□ 0.85
CPA4-205ENST00000474254 FAM205AQ6ZU69 1335 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 CLRN2A0PK11 232 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 SPDYE2BA6NHP3 402 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 IPO8O15397 1037 aaKnown RBP20.34■□□□□ 0.85
CPA4-205ENST00000474254 PDE8BO95263 885 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 SLC34A2O95436 690 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 ALDH1A1P00352 501 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 SPDYE6P0CI01 402 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 GYG1P46976 350 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 FAM84BQ96KN1 310 aaPredicted RBP20.34■□□□□ 0.85
CPA4-205ENST00000474254 FZD1Q9UP38 647 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
CPA4-205ENST00000474254 MANSC4A6NHS7 340 aaPredicted RBP20.33■□□□□ 0.85
CPA4-205ENST00000474254 FKTNO75072 461 aa20.33■□□□□ 0.85
CPA4-205ENST00000474254 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.85
CPA4-205ENST00000474254 ATF7IPQ6VMQ6 1270 aa20.33■□□□□ 0.85
CPA4-205ENST00000474254 TDRD7Q8NHU6 1098 aaKnown RBP20.33■□□□□ 0.85
CPA4-205ENST00000474254 PCDHAC2Q9Y5I4 1007 aa20.33■□□□□ 0.85
CPA4-205ENST00000474254 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms