RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 CENPFP49454 3210 aa22.31■■□□□ 1.16
CUL4A-208ENST00000474116 ECM29Q5VYK3 1845 aa22.3■■□□□ 1.16
CUL4A-208ENST00000474116 PPP1R12BO60237 982 aaPredicted RBP22.3■■□□□ 1.16
CUL4A-208ENST00000474116 C15orf52Q6ZUT6 534 aaKnown RBP22.3■■□□□ 1.16
CUL4A-208ENST00000474116 PTPN22Q9Y2R2 807 aa22.3■■□□□ 1.16
CUL4A-208ENST00000474116 SNAP23O00161 211 aa22.29■■□□□ 1.16
CUL4A-208ENST00000474116 HABP4Q5JVS0 413 aaKnown RBP22.29■■□□□ 1.16
CUL4A-208ENST00000474116 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
CUL4A-208ENST00000474116 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
CUL4A-208ENST00000474116 RBBP6Q7Z6E9 1792 aaKnown RBP22.29■■□□□ 1.16
CUL4A-208ENST00000474116 GJA5P36382 358 aa22.28■■□□□ 1.16
CUL4A-208ENST00000474116 KCNJ4P48050 445 aa22.28■■□□□ 1.16
CUL4A-208ENST00000474116 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
CUL4A-208ENST00000474116 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
CUL4A-208ENST00000474116 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 USP2O75604 605 aaPredicted RBP22.27■■□□□ 1.16
CUL4A-208ENST00000474116 SPDYE6P0CI01 402 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 SUPT20HL1Q3ZLR7 823 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 CFAP100Q494V2 611 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 NBPF12Q5TAG4 269 aaPredicted RBP22.27■■□□□ 1.16
CUL4A-208ENST00000474116 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
CUL4A-208ENST00000474116 AOX1Q06278 1338 aa22.27■■□□□ 1.16
CUL4A-208ENST00000474116 CLRN2A0PK11 232 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 TESPA1A2RU30 521 aaPredicted RBP22.26■■□□□ 1.15
CUL4A-208ENST00000474116 TAF5LO75529 589 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 IL1R1P14778 569 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
CUL4A-208ENST00000474116 CAP1Q01518 475 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 CRHR2Q13324 411 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 CD99L2Q8TCZ2 262 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 ARMC5Q96C12 935 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 PTPN18Q99952 460 aa22.26■■□□□ 1.15
CUL4A-208ENST00000474116 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
CUL4A-208ENST00000474116 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
CUL4A-208ENST00000474116 F8W031 263 aaPredicted RBP22.24■■□□□ 1.15
CUL4A-208ENST00000474116 MYO1BO43795 1136 aa22.24■■□□□ 1.15
CUL4A-208ENST00000474116 TWISTNBQ3B726 338 aaPredicted RBP22.24■■□□□ 1.15
CUL4A-208ENST00000474116 OTUD7BQ6GQQ9 843 aa22.24■■□□□ 1.15
CUL4A-208ENST00000474116 HELBQ8NG08 1087 aaPredicted RBP22.24■■□□□ 1.15
CUL4A-208ENST00000474116 BRCA2P51587 3418 aa22.24■■□□□ 1.15
CUL4A-208ENST00000474116 EN2P19622 333 aaPredicted RBP22.23■■□□□ 1.15
CUL4A-208ENST00000474116 IREB2P48200 963 aaKnown RBP22.23■■□□□ 1.15
CUL4A-208ENST00000474116 ANKRD13AQ8IZ07 590 aa22.23■■□□□ 1.15
CUL4A-208ENST00000474116 MYH16Q9H6N6 1097 aa22.23■■□□□ 1.15
CUL4A-208ENST00000474116 EFCC1Q9HA90 598 aa22.23■■□□□ 1.15
CUL4A-208ENST00000474116 FOXO4P98177 505 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 SP3Q02447 781 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 FLIIQ13045 1269 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 RASA3Q14644 834 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 LINS1Q8NG48 757 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 VEZTQ9HBM0 779 aa22.22■■□□□ 1.15
CUL4A-208ENST00000474116 ZNF804AQ7Z570 1209 aa22.21■■□□□ 1.15
CUL4A-208ENST00000474116 DNAAF4Q8WXU2 420 aa22.21■■□□□ 1.15
CUL4A-208ENST00000474116 MS4A4AQ96JQ5 239 aa22.2■■□□□ 1.14
CUL4A-208ENST00000474116 JAG2Q9Y219 1238 aa22.2■■□□□ 1.14
CUL4A-208ENST00000474116 OTOFQ9HC10 1997 aa22.19■■□□□ 1.14
CUL4A-208ENST00000474116 IFIT5Q13325 482 aaKnown RBP22.19■■□□□ 1.14
CUL4A-208ENST00000474116 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
CUL4A-208ENST00000474116 OPTNQ96CV9 577 aa22.19■■□□□ 1.14
CUL4A-208ENST00000474116 FKBP5Q13451 457 aaPredicted RBP22.18■■□□□ 1.14
CUL4A-208ENST00000474116 ELP3Q9H9T3 547 aa22.18■■□□□ 1.14
CUL4A-208ENST00000474116 KIAA0100Q14667 2235 aaKnown RBP22.17■■□□□ 1.14
CUL4A-208ENST00000474116 FAM205AQ6ZU69 1335 aa22.17■■□□□ 1.14
CUL4A-208ENST00000474116 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.142e-8■■■■■ 30
CUL4A-208ENST00000474116 SPDYE2Q495Y8 402 aa22.17■■□□□ 1.14
CUL4A-208ENST00000474116 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
CUL4A-208ENST00000474116 ZNF333Q96JL9 665 aa22.17■■□□□ 1.14
CUL4A-208ENST00000474116 TEPSINQ96N21 525 aa22.17■■□□□ 1.14
CUL4A-208ENST00000474116 ZNF70Q9UC06 446 aaPredicted RBP22.17■■□□□ 1.14
CUL4A-208ENST00000474116 FXR1P51114 621 aaKnown RBP eCLIP22.16■■□□□ 1.14
CUL4A-208ENST00000474116 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
CUL4A-208ENST00000474116 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
CUL4A-208ENST00000474116 BRI3BPQ8WY22 251 aa22.16■■□□□ 1.14
CUL4A-208ENST00000474116 EPHA10Q5JZY3 1008 aa22.15■■□□□ 1.14
CUL4A-208ENST00000474116 TDRD7Q8NHU6 1098 aaKnown RBP22.15■■□□□ 1.14
CUL4A-208ENST00000474116 CNKSR2Q8WXI2 1034 aa22.15■■□□□ 1.14
CUL4A-208ENST00000474116 ZNF594Q96JF6 807 aaPredicted RBP22.15■■□□□ 1.14
CUL4A-208ENST00000474116 TDRD3Q9H7E2 651 aaKnown RBP22.15■■□□□ 1.14
CUL4A-208ENST00000474116 SERPINA10Q9UK55 444 aa22.15■■□□□ 1.14
CUL4A-208ENST00000474116 TNFAIP1Q13829 316 aa22.14■■□□□ 1.13
CUL4A-208ENST00000474116 LMBR1LQ6UX01 489 aa22.14■■□□□ 1.13
CUL4A-208ENST00000474116 TMEM106CQ9BVX2 250 aa22.14■■□□□ 1.13
CUL4A-208ENST00000474116 CACNA1FO60840 1977 aa22.14■■□□□ 1.13
CUL4A-208ENST00000474116 IL16Q14005 1332 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 PLIN1O60240 522 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 BEND3Q5T5X7 828 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 LDHAL6AQ6ZMR3 332 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 TTF2Q9UNY4 1162 aaKnown RBP22.13■■□□□ 1.13
CUL4A-208ENST00000474116 CHMP3Q9Y3E7 222 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 PTCH2Q9Y6C5 1203 aa22.13■■□□□ 1.13
CUL4A-208ENST00000474116 VGLL4Q14135 290 aa22.12■■□□□ 1.13
CUL4A-208ENST00000474116 MFSD14BQ5SR56 506 aa22.12■■□□□ 1.13
CUL4A-208ENST00000474116 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
CUL4A-208ENST00000474116 ZFYVE28Q9HCC9 887 aa22.12■■□□□ 1.13
CUL4A-208ENST00000474116 CCL15-CCL14A0A0B4J2E2 113 aa22.11■■□□□ 1.13
CUL4A-208ENST00000474116 VAMP4O75379 141 aa22.11■■□□□ 1.13
CUL4A-208ENST00000474116 GTF2A2P52657 109 aa22.11■■□□□ 1.13
CUL4A-208ENST00000474116 MAP3K9P80192 1104 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms