RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 RAI14Q9P0K7 980 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 PTGER2P43116 358 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 NOL10Q9BSC4 688 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 POLLQ9UGP5 575 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 AKAP11Q9UKA4 1901 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 PDS5AQ29RF7 1337 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-202ENST00000474048 CCDC88AQ3V6T2 1871 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 PPIP5K2O43314 1243 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 KLRK1P26718 216 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 NMIQ13287 307 aaPredicted RBP12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 SCARF1Q14162 830 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
PRPF38A-202ENST00000474048 MAST2Q6P0Q8 1798 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 CD209Q9NNX6 404 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
PRPF38A-202ENST00000474048 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 IGSF3O75054 1194 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 GSTO1P78417 241 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 TDRD7Q8NHU6 1098 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 APPBP2Q92624 585 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 PSMD1Q99460 953 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 ANTXR1Q9H6X2 564 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 MAST3O60307 1309 aa12.34□□□□□ -0.43
PRPF38A-202ENST00000474048 SGSM2O43147 1006 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 IL1R1P14778 569 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 AOC3Q16853 763 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 PODNQ7Z5L7 613 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 TXNRD3Q86VQ6 643 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 PIH1D3Q9NQM4 214 aaKnown RBP12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
PRPF38A-202ENST00000474048 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 WTIPA6NIX2 430 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 EPB41L2O43491 1005 aaKnown RBP12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 ECE2O60344 883 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 LDHCP07864 332 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 PDE6AP16499 860 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 KCNA3P22001 575 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 ADD2P35612 726 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 JAG2Q9Y219 1238 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 CHD4Q14839 1912 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
PRPF38A-202ENST00000474048 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 ZBTB22O15209 634 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 CYP7A1P22680 504 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 GTF2IP78347 998 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 MFSD14BQ5SR56 506 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 NLGN2Q8NFZ4 835 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
PRPF38A-202ENST00000474048 COL1A1P02452 1464 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms