RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
USF1-205ENST00000473969 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
USF1-205ENST00000473969 JAG2Q9Y219 1238 aa16.96■□□□□ 0.31
USF1-205ENST00000473969 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
USF1-205ENST00000473969 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.3
USF1-205ENST00000473969 SHTN1A0MZ66 631 aa16.95■□□□□ 0.3
USF1-205ENST00000473969 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
USF1-205ENST00000473969 KIAA0825Q8IV33 1275 aa16.95■□□□□ 0.3
USF1-205ENST00000473969 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
USF1-205ENST00000473969 GMLQ99445 158 aa16.95■□□□□ 0.3
USF1-205ENST00000473969 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
USF1-205ENST00000473969 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 HSPA6P17066 643 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
USF1-205ENST00000473969 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 TRPM4Q8TD43 1214 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 XAGE2Q96GT9 111 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 GPR108Q9NPR9 543 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 ZNF609O15014 1411 aa16.94■□□□□ 0.3
USF1-205ENST00000473969 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
USF1-205ENST00000473969 SEMA3EO15041 775 aa16.93■□□□□ 0.3
USF1-205ENST00000473969 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
USF1-205ENST00000473969 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
USF1-205ENST00000473969 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
USF1-205ENST00000473969 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
USF1-205ENST00000473969 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
USF1-205ENST00000473969 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 ADORA1P30542 326 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
USF1-205ENST00000473969 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 WDR66Q8TBY9 1149 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
USF1-205ENST00000473969 APBB1O00213 710 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 RAB11FIP3O75154 756 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 PHKA1P46020 1223 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 APLP1P51693 650 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
USF1-205ENST00000473969 SCARF1Q14162 830 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 DLGAP5Q15398 846 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
USF1-205ENST00000473969 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
USF1-205ENST00000473969 UQCRFS1P1P0C7P4 283 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 AAMPQ13685 434 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 KIF1BPQ96EK5 621 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
USF1-205ENST00000473969 MYO1BO43795 1136 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 EGFRP00533 1210 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
USF1-205ENST00000473969 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
USF1-205ENST00000473969 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 MAST3O60307 1309 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 PSME4Q14997 1843 aa16.89■□□□□ 0.29
USF1-205ENST00000473969 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
USF1-205ENST00000473969 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
USF1-205ENST00000473969 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
USF1-205ENST00000473969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.88■□□□□ 0.29
USF1-205ENST00000473969 WNT10BO00744 389 aa16.87■□□□□ 0.29
USF1-205ENST00000473969 ITGBL1O95965 494 aaPredicted RBP16.87■□□□□ 0.29
USF1-205ENST00000473969 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
USF1-205ENST00000473969 USP48Q86UV5 1035 aa16.87■□□□□ 0.29
USF1-205ENST00000473969 AACSQ86V21 672 aa16.87■□□□□ 0.29
USF1-205ENST00000473969 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
USF1-205ENST00000473969 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
USF1-205ENST00000473969 SERPINA10Q9UK55 444 aa16.87■□□□□ 0.29
USF1-205ENST00000473969 ZBTB22O15209 634 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
USF1-205ENST00000473969 IFIT2P09913 472 aaKnown RBP16.86■□□□□ 0.29
USF1-205ENST00000473969 RASGRF1Q13972 1273 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 NBPF9Q3BBW0 867 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 SPTY2D1Q68D10 685 aaPredicted RBP16.86■□□□□ 0.29
USF1-205ENST00000473969 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 DBNDD2Q9BQY9 259 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
USF1-205ENST00000473969 ABCF2Q9UG63 623 aa16.86■□□□□ 0.29
USF1-205ENST00000473969 TMEM88BA6NKF7 163 aa16.85■□□□□ 0.29
USF1-205ENST00000473969 HDLBPQ00341 1268 aaKnown RBP16.85■□□□□ 0.29
USF1-205ENST00000473969 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
USF1-205ENST00000473969 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
USF1-205ENST00000473969 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
USF1-205ENST00000473969 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
USF1-205ENST00000473969 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
USF1-205ENST00000473969 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
USF1-205ENST00000473969 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
USF1-205ENST00000473969 TRAF5O00463 557 aa16.84■□□□□ 0.29
USF1-205ENST00000473969 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
USF1-205ENST00000473969 CRKP46108 304 aa16.84■□□□□ 0.29
USF1-205ENST00000473969 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
USF1-205ENST00000473969 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
USF1-205ENST00000473969 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
USF1-205ENST00000473969 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms