RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 SEC31BQ9NQW1 1179 aa9.9□□□□□ -0.82
SEC22A-204ENST00000473494 EPXP11678 715 aa9.89□□□□□ -0.83
SEC22A-204ENST00000473494 RHOVQ96L33 236 aa9.89□□□□□ -0.83
SEC22A-204ENST00000473494 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
SEC22A-204ENST00000473494 GJA8P48165 433 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 TNNI2P48788 182 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 VN1R5Q7Z5H4 357 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 CACTIN-AS1Q8N1I8 211 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 MICALL1Q8N3F8 863 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 CAPN10Q9HC96 672 aa9.88□□□□□ -0.83
SEC22A-204ENST00000473494 B3GALT4O96024 378 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 LIG3P49916 1009 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 SLC16A10Q8TF71 515 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 IRF7Q92985 503 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 TMEM74Q96NL1 305 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 KCNQ5Q9NR82 932 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 USP35Q9P2H5 1018 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 GPN3Q9UHW5 284 aaPredicted RBP9.87□□□□□ -0.83
SEC22A-204ENST00000473494 STARD13Q9Y3M8 1113 aa9.87□□□□□ -0.83
SEC22A-204ENST00000473494 PCDH1Q08174 1060 aa9.86□□□□□ -0.83
SEC22A-204ENST00000473494 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
SEC22A-204ENST00000473494 ZNF787Q6DD87 383 aa9.86□□□□□ -0.83
SEC22A-204ENST00000473494 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
SEC22A-204ENST00000473494 PHC3Q8NDX5 983 aa9.86□□□□□ -0.83
SEC22A-204ENST00000473494 ACDQ96AP0 544 aa9.86□□□□□ -0.83
SEC22A-204ENST00000473494 ADAMTS2O95450 1211 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 ALAS2P22557 587 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 GRIK5Q16478 980 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 DRC1Q96MC2 740 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 GMLQ99445 158 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 INPP5FQ9Y2H2 1132 aa9.85□□□□□ -0.83
SEC22A-204ENST00000473494 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
SEC22A-204ENST00000473494 ALBP02768 609 aa9.84□□□□□ -0.83
SEC22A-204ENST00000473494 EPHA1P21709 976 aa9.84□□□□□ -0.83
SEC22A-204ENST00000473494 RPS26P62854 115 aaKnown RBP9.84□□□□□ -0.83
SEC22A-204ENST00000473494 RELL1Q8IUW5 271 aa9.84□□□□□ -0.83
SEC22A-204ENST00000473494 LACRTQ9GZZ8 138 aa9.84□□□□□ -0.83
SEC22A-204ENST00000473494 ADAMTS1Q9UHI8 967 aa9.84□□□□□ -0.83
SEC22A-204ENST00000473494 H3BRJ5 948 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 PAGE1O75459 146 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 ESRRAP11474 423 aaPredicted RBP9.83□□□□□ -0.84
SEC22A-204ENST00000473494 CDC27P30260 824 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 GBP2P32456 591 aaPredicted RBP9.83□□□□□ -0.84
SEC22A-204ENST00000473494 PAK2Q13177 524 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 AGMOQ6ZNB7 445 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 C1orf229Q6ZS94 237 aaPredicted RBP9.83□□□□□ -0.84
SEC22A-204ENST00000473494 KIAA0825Q8IV33 1275 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 RASGRP4Q8TDF6 673 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
SEC22A-204ENST00000473494 SLURP2P0DP57 97 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 GARTP22102 1010 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 PPP2R3AQ06190 1150 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 MAP3K11Q16584 847 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 ZNF423Q2M1K9 1284 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 TTBK2Q6IQ55 1244 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 UBXN4Q92575 508 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 SPON2Q9BUD6 331 aa9.82□□□□□ -0.84
SEC22A-204ENST00000473494 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
SEC22A-204ENST00000473494 FAM177BA6PVY3 158 aa9.81□□□□□ -0.84
SEC22A-204ENST00000473494 F6X3S4 739 aa9.81□□□□□ -0.84
SEC22A-204ENST00000473494 EIF4A3P38919 411 aaKnown RBP9.81□□□□□ -0.84
SEC22A-204ENST00000473494 CABP4P57796 275 aa9.81□□□□□ -0.84
SEC22A-204ENST00000473494 LMNB2Q03252 620 aa9.81□□□□□ -0.84
SEC22A-204ENST00000473494 GDF6Q6KF10 455 aaPredicted RBP9.81□□□□□ -0.84
SEC22A-204ENST00000473494 NUDT8Q8WV74 236 aa9.81□□□□□ -0.84
SEC22A-204ENST00000473494 SOX17Q9H6I2 414 aaPredicted RBP9.81□□□□□ -0.84
SEC22A-204ENST00000473494 SH2B1Q9NRF2 756 aaPredicted RBP9.81□□□□□ -0.84
SEC22A-204ENST00000473494 OIP5O43482 229 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 NME2P22392 152 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 BAG6P46379 1132 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 AFF1P51825 1210 aaKnown RBP9.8□□□□□ -0.84
SEC22A-204ENST00000473494 IKBKEQ14164 716 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 CHSY3Q70JA7 882 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 TANGO6Q9C0B7 1094 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 PRDM6Q9NQX0 595 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 TLR6Q9Y2C9 796 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
SEC22A-204ENST00000473494 FGRP09769 529 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
SEC22A-204ENST00000473494 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 TRIM42Q8IWZ5 723 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 WNT8BQ93098 351 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 SPATA32Q96LK8 384 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 PRKAG2Q9UGJ0 569 aa9.79□□□□□ -0.84
SEC22A-204ENST00000473494 SUPT16HQ9Y5B9 1047 aaKnown RBP9.79□□□□□ -0.84
SEC22A-204ENST00000473494 MINDY4BA8MYZ0 360 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 LILRB5O75023 590 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 PF4P02776 101 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 BMP6P22004 513 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
SEC22A-204ENST00000473494 ARID5AQ03989 594 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
SEC22A-204ENST00000473494 ARMC5Q96C12 935 aa9.78□□□□□ -0.84
SEC22A-204ENST00000473494 SHISA8B8ZZ34 492 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms