RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 TIMM10P62072 90 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 ERCC6LQ2NKX8 1250 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 SPTLC2O15270 562 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 L2HGDHQ9H9P8 463 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 MAST3O60307 1309 aa16.54■□□□□ 0.24
NHLRC3-204ENST00000473371 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 NLRP12P59046 1061 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 SYNE3Q6ZMZ3 975 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 ABCC6O95255 1503 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 ZNF202O95125 648 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 YEATS4O95619 227 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 IFIT1P09914 478 aaKnown RBP16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 LRP10Q7Z4F1 713 aa16.53■□□□□ 0.24
NHLRC3-204ENST00000473371 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
NHLRC3-204ENST00000473371 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.23
NHLRC3-204ENST00000473371 LMOD1P29536 600 aaPredicted RBP16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 BMS1Q14692 1282 aaKnown RBP16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 M0R2C6 588 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 KCNJ6P48051 423 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 CASP7P55210 303 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 ATG9AQ7Z3C6 839 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 ORAI2Q96SN7 254 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 TUBB4AP04350 444 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 HAND2P61296 217 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 FANCCQ00597 558 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 LRRN4CLQ8ND94 238 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 FBXO18Q8NFZ0 1043 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
NHLRC3-204ENST00000473371 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 STRCQ7RTU9 1775 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 CPLX1O14810 134 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 PHKG2P15735 406 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 NCAPHQ15003 741 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 ST7Q9NRC1 585 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 NEDD4P46934 1319 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
NHLRC3-204ENST00000473371 PFKFB1P16118 471 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 IL15P40933 162 aaPredicted RBP16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 FOXO4P98177 505 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 GJB4Q9NTQ9 266 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 CCP110O43303 1012 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 EVCP57679 992 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 ARHGAP29Q52LW3 1261 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 SLIT3O75094 1523 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 PRC1O43663 620 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
NHLRC3-204ENST00000473371 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 CMA1P23946 247 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 CLCN6P51797 869 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 ETF1P62495 437 aaKnown RBP16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 FBXL16Q8N461 479 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
NHLRC3-204ENST00000473371 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 KIF28PB7ZC32 967 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 IKBKBO14920 756 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 AXDND1Q5T1B0 1012 aaPredicted RBP16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 ZNF594Q96JF6 807 aaPredicted RBP16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 ERICH4A6NGS2 130 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 SERPINC1P01008 464 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 UBXN4Q92575 508 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 H7C1W4 665 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms