RNA–Protein interactions for RNA: ENST00000473002.1

ITGA4-206, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-206ENST00000473002 HHIPQ96QV1 700 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
ITGA4-206ENST00000473002 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
ITGA4-206ENST00000473002 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
ITGA4-206ENST00000473002 OSMRQ99650 979 aa8.65□□□□□ -1.02
ITGA4-206ENST00000473002 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.02
ITGA4-206ENST00000473002 PBRM1Q86U86 1689 aa8.65□□□□□ -1.03
ITGA4-206ENST00000473002 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
ITGA4-206ENST00000473002 IFT140Q96RY7 1462 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 H3BRJ5 948 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 EDN3P14138 238 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 CABP4P57796 275 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 ARHGAP4P98171 946 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 PRSS36Q5K4E3 855 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
ITGA4-206ENST00000473002 AGGF1Q8N302 714 aaeCLIP8.64□□□□□ -1.03
ITGA4-206ENST00000473002 TMEM102Q8N9M5 508 aaPredicted RBP8.64□□□□□ -1.03
ITGA4-206ENST00000473002 KLHL23Q8NBE8 558 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
ITGA4-206ENST00000473002 WISP1O95388 367 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 CYB5RLQ6IPT4 315 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 Q6ZS46 218 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
ITGA4-206ENST00000473002 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 ZFYVE28Q9HCC9 887 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 SOX13Q9UN79 622 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 KIF13AQ9H1H9 1805 aa8.63□□□□□ -1.03
ITGA4-206ENST00000473002 KLHDC7BQ96G42 594 aa8.62□□□□□ -1.03
ITGA4-206ENST00000473002 SNAPC4Q5SXM2 1469 aa8.62□□□□□ -1.03
ITGA4-206ENST00000473002 NDUFB5O43674 189 aa8.61□□□□□ -1.03
ITGA4-206ENST00000473002 PIP4K2BP78356 416 aa8.61□□□□□ -1.03
ITGA4-206ENST00000473002 PEAR1Q5VY43 1037 aaPredicted RBP8.61□□□□□ -1.03
ITGA4-206ENST00000473002 ACAD11Q709F0 780 aa8.61□□□□□ -1.03
ITGA4-206ENST00000473002 WNT8BQ93098 351 aa8.61□□□□□ -1.03
ITGA4-206ENST00000473002 LATS2Q9NRM7 1088 aa8.61□□□□□ -1.03
ITGA4-206ENST00000473002 CUX1P39880 1505 aa8.6□□□□□ -1.03
ITGA4-206ENST00000473002 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
ITGA4-206ENST00000473002 ADAM11O75078 769 aa8.6□□□□□ -1.03
ITGA4-206ENST00000473002 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
ITGA4-206ENST00000473002 GLB1P16278 677 aa8.6□□□□□ -1.03
ITGA4-206ENST00000473002 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
ITGA4-206ENST00000473002 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
ITGA4-206ENST00000473002 FOXD4L4Q8WXT5 416 aaPredicted RBP8.6□□□□□ -1.03
ITGA4-206ENST00000473002 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
ITGA4-206ENST00000473002 DUOXA2Q1HG44 320 aa8.59□□□□□ -1.03
ITGA4-206ENST00000473002 Q8N3U1 123 aa8.59□□□□□ -1.03
ITGA4-206ENST00000473002 UBASH3BQ8TF42 649 aa8.59□□□□□ -1.03
ITGA4-206ENST00000473002 SLC7A3Q8WY07 619 aa8.59□□□□□ -1.03
ITGA4-206ENST00000473002 BHLHE41Q9C0J9 482 aaPredicted RBP8.59□□□□□ -1.03
ITGA4-206ENST00000473002 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
ITGA4-206ENST00000473002 PRR23CQ6ZRP0 262 aa8.58□□□□□ -1.04
ITGA4-206ENST00000473002 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
ITGA4-206ENST00000473002 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
ITGA4-206ENST00000473002 ASAP3Q8TDY4 903 aa8.58□□□□□ -1.04
ITGA4-206ENST00000473002 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
ITGA4-206ENST00000473002 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
ITGA4-206ENST00000473002 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
ITGA4-206ENST00000473002 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
ITGA4-206ENST00000473002 CITED4Q96RK1 184 aa8.57□□□□□ -1.04
ITGA4-206ENST00000473002 UBL7Q96S82 380 aaPredicted RBP8.57□□□□□ -1.04
ITGA4-206ENST00000473002 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
ITGA4-206ENST00000473002 FGD5Q6ZNL6 1462 aa8.57□□□□□ -1.04
ITGA4-206ENST00000473002 NEFLP07196 543 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 ARL4DP49703 201 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 NLRP12P59046 1061 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 C19orf57Q0VDD7 668 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 IKBKEQ14164 716 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 CEP41Q9BYV8 373 aa8.56□□□□□ -1.04
ITGA4-206ENST00000473002 A0A1W2PP55 124 aa8.55□□□□□ -1.04
ITGA4-206ENST00000473002 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
ITGA4-206ENST00000473002 METTL12A8MUP2 240 aa8.55□□□□□ -1.04
ITGA4-206ENST00000473002 SOX1O00570 391 aaPredicted RBP8.55□□□□□ -1.04
ITGA4-206ENST00000473002 ORC1Q13415 861 aa8.55□□□□□ -1.04
ITGA4-206ENST00000473002 XP32Q5T750 250 aa8.55□□□□□ -1.04
ITGA4-206ENST00000473002 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
ITGA4-206ENST00000473002 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
ITGA4-206ENST00000473002 GPR182O15218 404 aa8.54□□□□□ -1.04
ITGA4-206ENST00000473002 BRD1O95696 1058 aa8.54□□□□□ -1.04
ITGA4-206ENST00000473002 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
ITGA4-206ENST00000473002 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
ITGA4-206ENST00000473002 IGHA2P01877 340 aa8.53□□□□□ -1.04
ITGA4-206ENST00000473002 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
ITGA4-206ENST00000473002 CCNJLQ8IV13 435 aa8.53□□□□□ -1.04
ITGA4-206ENST00000473002 ARMC10Q8N2F6 343 aa8.53□□□□□ -1.04
ITGA4-206ENST00000473002 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
ITGA4-206ENST00000473002 LIN7BQ9HAP6 207 aa8.53□□□□□ -1.04
ITGA4-206ENST00000473002 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
ITGA4-206ENST00000473002 UVSSAQ2YD98 709 aa8.52□□□□□ -1.05
ITGA4-206ENST00000473002 FAM46AQ96IP4 442 aaKnown RBP8.52□□□□□ -1.05
ITGA4-206ENST00000473002 TCF12Q99081 682 aa8.52□□□□□ -1.05
ITGA4-206ENST00000473002 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
ITGA4-206ENST00000473002 RNF208Q9H0X6 261 aa8.52□□□□□ -1.05
ITGA4-206ENST00000473002 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
ITGA4-206ENST00000473002 A0A096LPE4 126 aa8.51□□□□□ -1.05
ITGA4-206ENST00000473002 A0A1W2PPZ6 126 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms