RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 GREM2Q9H772 168 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
SMC4-214ENST00000472991 CSF1RP07333 972 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 ANKRD44Q8N8A2 993 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
SMC4-214ENST00000472991 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
SMC4-214ENST00000472991 DUOX1Q9NRD9 1551 aa11.4□□□□□ -0.58
SMC4-214ENST00000472991 UTRNP46939 3433 aa11.4□□□□□ -0.59
SMC4-214ENST00000472991 GNAI3P08754 354 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 ITGA6P23229 1130 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 PDE3AQ14432 1141 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
SMC4-214ENST00000472991 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 SNED1Q8TER0 1413 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
SMC4-214ENST00000472991 SMAPO00193 183 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
SMC4-214ENST00000472991 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
SMC4-214ENST00000472991 CCDC93Q567U6 631 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 ANKRD18AQ8IVF6 992 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
SMC4-214ENST00000472991 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
SMC4-214ENST00000472991 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
SMC4-214ENST00000472991 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 BBOX1O75936 387 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
SMC4-214ENST00000472991 RASSF7Q02833 373 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
SMC4-214ENST00000472991 SOGA3Q5TF21 947 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 TATDN2Q93075 761 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 NPDC1Q9NQX5 325 aaPredicted RBP11.37□□□□□ -0.59
SMC4-214ENST00000472991 TSR3Q9UJK0 312 aaKnown RBP11.37□□□□□ -0.59
SMC4-214ENST00000472991 DDX19BQ9UMR2 479 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 PSME4Q14997 1843 aa11.37□□□□□ -0.59
SMC4-214ENST00000472991 NFKBIEO00221 500 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
SMC4-214ENST00000472991 GNAI2P04899 355 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
SMC4-214ENST00000472991 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
SMC4-214ENST00000472991 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 SP8Q8IXZ3 490 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
SMC4-214ENST00000472991 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
SMC4-214ENST00000472991 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 TMX4Q9H1E5 349 aaPredicted RBP11.35□□□□□ -0.59
SMC4-214ENST00000472991 TAOK3Q9H2K8 898 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
SMC4-214ENST00000472991 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
SMC4-214ENST00000472991 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
SMC4-214ENST00000472991 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
SMC4-214ENST00000472991 RTKN2Q8IZC4 609 aa11.34□□□□□ -0.59
SMC4-214ENST00000472991 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
SMC4-214ENST00000472991 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
SMC4-214ENST00000472991 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
SMC4-214ENST00000472991 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
SMC4-214ENST00000472991 COL4A5P29400 1685 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 ZNF646O15015 1829 aaPredicted RBP11.33□□□□□ -0.6
SMC4-214ENST00000472991 PRELPP51888 382 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 GPSM2P81274 684 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMC4-214ENST00000472991 MTX1Q13505 466 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 DPP8Q6V1X1 898 aaPredicted RBP11.33□□□□□ -0.6
SMC4-214ENST00000472991 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 MPNDQ8N594 471 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
SMC4-214ENST00000472991 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 GRIPAP1Q4V328 841 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 PSMD1Q99460 953 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 NSFL1CQ9UNZ2 370 aaKnown RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
SMC4-214ENST00000472991 XDHP47989 1333 aa11.32□□□□□ -0.6
SMC4-214ENST00000472991 UFL1O94874 794 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 LMNB1P20700 586 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 CHRNDQ07001 517 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms