RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 SASH1O94885 1247 aa12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 ADORA1P30542 326 aa12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 EPS15P42566 896 aa12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 RSBN1LQ6PCB5 846 aaPredicted RBP12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 MXD3Q9BW11 206 aa12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 GNL3LQ9NVN8 582 aaKnown RBP12.96□□□□□ -0.33
SMARCD3-208ENST00000472789 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 IL1R1P14778 569 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 EPHX2P34913 555 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 SCNN1DP51172 638 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 STRIP1Q5VSL9 837 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 XAGE2Q96GT9 111 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 GPRC5DQ9NZD1 345 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
SMARCD3-208ENST00000472789 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 H7C1D1 291 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 RPS12P25398 132 aaKnown RBP12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
SMARCD3-208ENST00000472789 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 PHKA1P46020 1223 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 NUCB1Q02818 461 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 AACSQ86V21 672 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 CHD1LQ86WJ1 897 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 KIAA0825Q8IV33 1275 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 DPF2Q92785 391 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 ZNF609O15014 1411 aa12.93□□□□□ -0.34
SMARCD3-208ENST00000472789 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 USP17L8P0C7I0 530 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 TBC1D10BQ4KMP7 808 aaPredicted RBP12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 TTC39AQ5SRH9 613 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 DBNDD2Q9BQY9 259 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-208ENST00000472789 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 EAF2Q96CJ1 260 aaPredicted RBP12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
SMARCD3-208ENST00000472789 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 RBM5P52756 815 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 CERS5Q8N5B7 392 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 TBC1D22AQ8WUA7 517 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 TLR7Q9NYK1 1049 aaKnown RBP12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 DENND2AQ9ULE3 1009 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 SCN4AP35499 1836 aa12.9□□□□□ -0.34
SMARCD3-208ENST00000472789 SEMA3EO15041 775 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 GMLQ99445 158 aa12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-208ENST00000472789 FOXN1O15353 648 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 RGS3P49796 1198 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 MYOZ2Q9NPC6 264 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 SNRKQ9NRH2 765 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 PSME4Q14997 1843 aa12.88□□□□□ -0.35
SMARCD3-208ENST00000472789 EGFRP00533 1210 aa12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 ZNF280AP59817 542 aaPredicted RBP12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms