RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ZNF280CQ8ND82 737 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 SUV39H2Q9H5I1 410 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 KLF15Q9UIH9 416 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 ZNF232Q9UNY5 417 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 GJA3Q9Y6H8 435 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 ABCC11Q96J66 1382 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 PIK3C2GO75747 1445 aa5.15□□□□□ -1.58
XRN1-209ENST00000472625 BLMP54132 1417 aaPredicted RBP5.15□□□□□ -1.58
XRN1-209ENST00000472625 PXDNQ92626 1479 aa5.15□□□□□ -1.58
XRN1-209ENST00000472625 SERTM1A2A2V5 107 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 IGFBP4P22692 258 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 COL8A1P27658 744 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 PCBP4P57723 403 aaKnown RBP5.15□□□□□ -1.59
XRN1-209ENST00000472625 SAMD5Q5TGI4 173 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 C1orf53Q5VUE5 145 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 FIGNL1Q6PIW4 674 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 LRRC69Q6ZNQ3 347 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 SLCO4C1Q6ZQN7 724 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 ALDH16A1Q8IZ83 802 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 SCG3Q8WXD2 468 aaKnown RBP5.15□□□□□ -1.59
XRN1-209ENST00000472625 PBXIP1Q96AQ6 731 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 MDFIQ99750 246 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 PHACTR1Q9C0D0 580 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 DMGDHQ9UI17 866 aaKnown RBP5.15□□□□□ -1.59
XRN1-209ENST00000472625 GDF2Q9UK05 429 aaPredicted RBP5.15□□□□□ -1.59
XRN1-209ENST00000472625 SERPINA10Q9UK55 444 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 HCN4Q9Y3Q4 1203 aa5.15□□□□□ -1.59
XRN1-209ENST00000472625 TNS3Q68CZ2 1445 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 KNDC1Q76NI1 1749 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 FAM157BP0CG42 384 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 EPXP11678 715 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 FKBP5Q13451 457 aaPredicted RBP5.14□□□□□ -1.59
XRN1-209ENST00000472625 UNC5CLQ8IV45 518 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 HSH2DQ96JZ2 352 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 ORAI2Q96SN7 254 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 LRFN2Q9ULH4 789 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 SBNO1A3KN83 1393 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 DHX57Q6P158 1386 aaKnown RBP5.14□□□□□ -1.59
XRN1-209ENST00000472625 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.14□□□□□ -1.59
XRN1-209ENST00000472625 PPLO60437 1756 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 SPATA31E1Q6ZUB1 1445 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 ANKARQ7Z5J8 1434 aa5.14□□□□□ -1.59
XRN1-209ENST00000472625 YTHDC2Q9H6S0 1430 aaKnown RBP5.14□□□□□ -1.59
XRN1-209ENST00000472625 BCL9LQ86UU0 1499 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 USP32Q8NFA0 1604 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 KRBA1A5PL33 1030 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 CARNS1A5YM72 827 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
XRN1-209ENST00000472625 PPP1R12BO60237 982 aaPredicted RBP5.13□□□□□ -1.59
XRN1-209ENST00000472625 ARAFP10398 606 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 SWI5Q1ZZU3 235 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 RAB44Q7Z6P3 723 aaPredicted RBP5.13□□□□□ -1.59
XRN1-209ENST00000472625 FCHSD1Q86WN1 690 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 FAM200AQ8TCP9 573 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 BTBD6Q96KE9 485 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 SPOCK3Q9BQ16 436 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 LRRC4BQ9NT99 713 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 MKL2Q9ULH7 1088 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 SPATA31A3Q5VYP0 1347 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 SLIT2O94813 1529 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 DLC1Q96QB1 1528 aa5.13□□□□□ -1.59
XRN1-209ENST00000472625 FOXO3O43524 673 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 TYRO3Q06418 890 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 VPS72Q15906 364 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 PHLDB3Q6NSJ2 640 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 LINC00114Q6XXX2 140 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 CHSY3Q70JA7 882 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 RHPN1Q8TCX5 695 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 DDX17Q92841 729 aaKnown RBP5.12□□□□□ -1.59
XRN1-209ENST00000472625 SUSD3Q96L08 255 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 PRIMPOLQ96LW4 560 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 GPC6Q9Y625 555 aaPredicted RBP5.12□□□□□ -1.59
XRN1-209ENST00000472625 GPRASP1Q5JY77 1395 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 RALGAPBQ86X10 1494 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 NRXN1Q9ULB1 1477 aa5.12□□□□□ -1.59
XRN1-209ENST00000472625 MSTNO14793 375 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 PROCP04070 461 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 ADH6P28332 368 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 SCNN1AP37088 669 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 BAG6P46379 1132 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 DGKGP49619 791 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 SFSWAPQ12872 951 aaKnown RBP5.11□□□□□ -1.59
XRN1-209ENST00000472625 FAM182BQ5T319 152 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 CLP1Q92989 425 aaKnown RBP5.11□□□□□ -1.59
XRN1-209ENST00000472625 CCDC97Q96F63 343 aaPredicted RBP5.11□□□□□ -1.59
XRN1-209ENST00000472625 MYO19Q96H55 970 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 PSMG3-AS1Q96PY0 264 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 HINFPQ9BQA5 517 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 MARK1Q9P0L2 795 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 CXXC1Q9P0U4 656 aaPredicted RBP5.11□□□□□ -1.59
XRN1-209ENST00000472625 PRR12Q9ULL5 1215 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 ADGRB2O60241 1585 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 FMN2Q9NZ56 1722 aa5.11□□□□□ -1.59
XRN1-209ENST00000472625 TNFRSF10BO14763 440 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 PRMT3O60678 531 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 IGHA1P01876 353 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 KCNQ4P56696 695 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 RGL3Q3MIN7 710 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 KRT28Q7Z3Y7 464 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms